Job Description O05204 Confidence 95.71% Date Tue Jul 17 17:05:01 BST 2012 Rank 380 Aligned Residues 137 % Identity 14% Template c1nytC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: shikimate dehydrogenase aroe complexed with nadp+ Resolution 1.50 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.							.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.														.	.	.	.	.	.
Query SS confidence															.														.	.	.	.	.	.
Query Sequence		A	G	I	P	L	G	H	E	F	N	S	L	V	.	L	A	I	L	Q	V	S	G	R	A	P	K	E	.	.	.	.	.	.	K	Q	S	I	I	D	Q	I	K	K	L	E	G	S	F	H	F	E	T	F	I	S	L	T	C	Q	K	C	P	D	V	V	Q	A	L	N	L	M	S	V	I	N	P	N	I	T	H
Query Conservation															.														.	.	.	.	.	.
Alig confidence															.														.	.	.	.	.	.															.				.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.				.																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	N	P	I	A	H	S	K	S	P	F	I	H	Q	Q	F	A	Q	Q	L	N	I	E	H	P	Y	G	R	V	L	A	P	I	N	D	F	I	N	T	L	N	A	F	F	S	A	.	G	G	K	.	G	A	N	V	T	V	P	F	K	E	E	A	F	A	R	A	D	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S		T	T		S													T												T	T												T	.	T			.						T	T										S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.				.																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	I	D	G	A	V	F	R	E	E	S	E	N	I	M	A	V	P	A	V	F	L	N	G	E	E	F	G	N	G	R	M	T	I	Q	D	I	L	S	K	L	G	S	T	A	D	A	S	E	F	E	N	K	E	P	Y	D	V	L	I	V	G	G	G	P	A	S	G	S	A	A	I	Y	T	A	R	K	G	L
Query Conservation
Alig confidence		.	.	.	.	.	.																																																	.	.	.	.
Template Conservation		.	.	.	.	.	.																																																	.	.	.	.
Template Sequence		.	.	.	.	.	.	E	L	T	E	R	A	A	L	A	G	A	V	N	T	L	M	R	L	E	D	G	R	L	L	G	D	N	T	D	G	V	G	L	L	S	D	L	E	R	L	S	F	I	R	P	G	L	R	.	.	.	.	I	L	L	I	G	A	G	G	A	S	R	G	V	L	L	P	L	L	S	L	D	C
Template Known Secondary structure		.	.	.	.	.	.										T	S		S						T	T	S																				T				T	T			.	.	.	.							S													T	T
Template Predicted Secondary structure		.	.	.	.	.	.																																																	.	.	.	.
Template SS confidence
								74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	G	I	V	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	T	I	T	N	R
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions