Job Description O05204 Confidence 99.98% Date Tue Jul 17 17:05:01 BST 2012 Rank 77 Aligned Residues 285 % Identity 19% Template c1cjcA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (adrenodoxin reductase); PDBTitle: structure of adrenodoxin reductase of mitochondrial p4502 systems Resolution 1.70 Å

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		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																											.	.										.
Query SS confidence																											.	.										.
Query Sequence		E	P	Y	D	V	L	I	V	G	G	G	P	A	S	G	S	A	A	I	Y	T	A	R	K	G	.	.	L	R	T	G	I	V	A	D	R	.	I	G	G	Q	V	N	D	T	A	G	I	E	N	F	I	T	V	K	E	T	T	G	S	E	F	S	S	N	L	A	A	H	I	D	Q	Y	D	I	D	A	M	T	G
Query Conservation																											.	.										.
Alig confidence				.																							.	.										.																		.	.	.	.	.
Template Conservation				.																																																				.	.	.	.	.
Template Sequence		T	P	.	Q	I	C	V	V	G	S	G	P	A	G	F	Y	T	A	Q	H	L	L	K	H	H	S	R	A	H	V	D	I	Y	E	K	Q	L	V	P	F	G	L	V	R	F	G	V	A	P	D	H	P	E	V	.	.	.	.	.	K	N	V	I	N	T	F	T	Q	T	A	R	S	D	R	C	A	F	Y	G	N
Template Known Secondary structure				.								S															S	S								S	S	S	S	S		T					T	S		T	T		G	G	G	.	.	.	.	.	G	G										T	S	T	T					B	S
Template Predicted Secondary structure				.																																																				.	.	.	.	.
Template SS confidence
		6	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.										.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																					.										.	.	.	.	.	.	.	.	.
Query SS confidence																																					.										.	.	.	.	.	.	.	.	.
Query Sequence		I	R	A	T	D	I	E	K	T	D	E	A	I	K	V	T	L	E	N	G	A	V	L	E	S	K	T	V	I	I	A	T	G	A	G	.	W	R	K	L	N	I	P	G	E	.	.	.	.	.	.	.	.	.	E	Q	L	I	N	K	G	V	A	F	C	P	H	C	D	G	P	L	F	E	N	K	D	V	A	V
Query Conservation																																					.										.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.												.													.										.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.												.
Template Sequence		V	E	V	.	.	.	.	.	.	.	.	G	R	D	V	T	V	Q	E	L	Q	D	.	A	Y	H	A	V	V	L	S	Y	G	A	E	D	H	Q	A	L	D	I	P	G	E	E	L	P	G	V	F	S	A	R	A	F	V	G	W	Y	N	G	L	P	E	N	R	E	L	A	P	D	L	S	C	D	T	A	V	I
Template Known Secondary structure				B	.	.	.	.	.	.	.	.	T	T	T	B								.		S	S																	T	T	T	T	S	T	T												T	T		G	G	G	T	T					T	T	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.												.
Template SS confidence
		80	.	.									.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.																						.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	G	G	N	S	G	V	E	A	A	I	D	L	A	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	H	V	T	L	F	E	F	A	S	E	L	K	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	Q	G	N	V	A	L	D	V	A	R	I	L	L	T	P	P	D	H	L	E	K	T	D	I	T	E	A	A	L	G	A	L	R	Q	S	R	V	K	T	V	W	I	V	G	R	R	G	P	L	Q	V	A	F	T	I	K	E	L	R	E	M	I	Q	L	P	G	T	R	P	M	L	D	P	A	D	F	L	G
Template Known Secondary structure			S		S												S		G	G	G	G	T	T	S												T											S	S		G	G	G													T		T	T							G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
																															384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.				.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.												.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.												.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	L	Q	D	R	L	R	S	L	S	N	V	D	I	K	T	N	A	K	T	T	E	V	V	G	E	D	.	.	.	H	V	T	G	I	R	Y	E	D	M	N	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.												.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	D	R	I	K	E	A	A	R	P	R	K	R	L	M	E	L	L	L	R	T	A	T	E	K	P	G	V	E	E	A	A	R	R	A	S	A	S	R	A	W	G	L	R	F	F	R	S	P	Q	Q	V	L	P	S	P	D	G	R	R	A	A	G	I	R	L	A	V	T	R	L	E	G	I	G	E	A	T	R
Template Known Secondary structure						T	T	T	S																	S												T		S								S										T	T	S	S	S													S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
					423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.		.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																											.
Query SS confidence		.	.	.																																											.
Query Sequence		.	.	.	T	G	E	E	H	L	L	N	L	D	G	I	F	V	Q	I	G	L	L	P	N	T	S	W	L	N	D	A	V	E	L	N	E	R	G	E	I	V	I	D	R	N	.	N	N	T	N	V	P	G	I	F	A	A	G	D	V	T	D	Q	K	N	K	Q	I	I	I	S	M	G	A	G	A	N	A	A	L
Query Conservation		.	.	.																																											.
Alig confidence		.	.	.																						.	.																				.
Template Conservation																										.	.
Template Sequence		A	V	P	T	G	D	V	E	D	L	P	C	G	L	V	L	S	S	I	G	Y	K	S	R	.	.	P	I	D	P	S	V	P	F	D	P	K	L	G	V	V	P	N	M	E	G	R	V	V	D	V	P	G	L	Y	C	S	G	W	V	K	R	G	P	T	G	V	I	T	T	T	M	T	D	S	F	L	T	G	Q
Template Known Secondary structure														S												.	.				T	T	S			B	T	T	T	T	B					T	T			T	T		T	T					T						T	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		499	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	F	D	Y	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	L	Q	D	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions