 |
| Job Description | P60393 | | Confidence | 99.04% | Date | Tue Jul 17 17:05:11 BST 2012 |
| Rank | 79 | Aligned Residues | 99 |
| % Identity | 13% | Template | d2igta1 |
| SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| hypothetical RNA methyltransferase
|
| Resolution | 1.89 |
|
 |
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
|
70 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | F | H | H | I | S | V | M | L | N | E | T | I | D | Y | L | N | V | K | E | N | G | V | Y | I | D | C | T | L | G | G | A | G | H | A | L | Y | L | L | N | Q | L | N | D | D | G | R | L | I | A | I | D | Q | D | Q | T | A | I | D | N | A | K | E | V | L | K | D | H | L | . |
. |
. |
H | K | V | T | F | V | H | S |
| Query Conservation |   |
  |
|   |
|   |
|
|
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|
|
|   |   |
|
|   |   |
|   |
|   |
|   |
|
|
|
|
|   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   | . | . | . |   |
|
|   |   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |
|
|   |   | . | . | . |
|
|   |
|   |   |
|
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |
| Template Sequence |   |
F | P | E | Q | I | V | H | W | E | W | L | K | N | A | V | E | T | A | D | R | P | L | K | V | L | N | L | F | G | Y | T | G | V | A | S | L | V | A | A | A | A | . |
. |
. |
G | A | E | V | T | H | V | D | A | S | K | K | A | I | G | W | A | K | E | N | Q | V | L | A | G | L | E | Q | A | P | I | R | W | I | C | E |
| Template Known Secondary structure |   |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
|  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |  |  |  | T | . | . | . | T |
|  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T | S |
|  |  |  |  |
| S |
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
|
. | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | F | R | E | L | T | Q | I | L | K | D | L | N | I | E | K | V | D | G | I | Y | Y | D | L | G | V |
| Query Conservation |   |
  |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |
|   |   |   |   |   |   |   | . |   |   |
|
|   |
|
|
|
|
|
|   |
| Template Sequence |   |
D | A | X | K | F | I | Q | R | E | E | R | R | G | . |
S | T | Y | D | I | I | L | T | D | P | P | K |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | T | . |
|
| B | S |  |  |  |  |
|
|
| S |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | |
. | . | . | . | . | . | . | 210 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|