 |
| Job Description | P60393 | | Confidence | 65.19% | Date | Tue Jul 17 17:05:11 BST 2012 |
| Rank | 423 | Aligned Residues | 66 |
| % Identity | 21% | Template | c3uekA_ |
| PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:poly(adp-ribose) glycohydrolase; |
PDBTitle: crystal structure of the catalytic domain of rat poly (adp-ribose)2 glycohydrolase
|
| Resolution | 1.95 Å |
|
 |
|   |   |
155 | . | . | |
|
|
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | |
|
. | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | E | E | . |
. |
. |
K | F | S | K | Q | I | A | R | R | I | E | A | H | R | E | Q | Q | P | I | T | T | T | L | E | L | V | D | I | I | K | E | G | I | P | A | K | A | R | R | K | G | G | H | P | A | K | R | V | F | Q | A | L | R | I | A | V | N | D | E | L | S | A | F | E | . |
. |
D | S | I | E | Q | A | I | E |
| Query Conservation |   |
|
|
| . | . | . |   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|
|   |   |
|   | . | . |   |   |
|   |   |   |   |   |
| Alig confidence |   |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   | . | . |
|   |   |   |   |   |   |   |   | . | . | . | . | . |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |
|
|
| Template Sequence |   |
G | E | R | T | A | G | S | R | W | E | L | I | Q | T | A | L | L | N | . |
. |
. |
. |
. |
K | F | T | R | P | Q | N | L | K | D | A | I | L | K | Y | . |
. |
N | V | A | Y | S | K | K | W | D | . |
. |
. |
. |
. |
F | T | A | L | V | D | F | W | D | K | V | L | E | E | A | E | A | Q | H | L | Y | Q | S | I | L | P |
| Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | . | . | . | . | . |
|
|
| S |  |  |  |  |  |  |  |  |  |  | T | . | . |
| G | G | G | T | T | T |
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  | T |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |
|
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
524 | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | |
|
. | . | . | 560 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . |
|   |
|   |   |
230 | . | . |
| Predicted Secondary structure |   |
 |  |
|
| Query SS confidence |   |
|
|
|
| Query Sequence |   |
L | V | K |
| Query Conservation |   |
  |
|   |
| Alig confidence |   |
|
|
|
| Template Conservation |   |
  |
|   |
| Template Sequence |   |
D | M | V |
| Template Known Secondary structure |   |
 |  |  |
| Template Predicted Secondary structure |   |
 |  |  |
| Template SS confidence |   |
|
|
|
|   |   |
592 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|