 |
| Job Description | P60393 | | Confidence | 95.32% | Date | Tue Jul 17 17:05:11 BST 2012 |
| Rank | 334 | Aligned Residues | 70 |
| % Identity | 14% | Template | c3cvoA_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:methyltransferase-like protein of unknown function; |
PDBTitle: crystal structure of a methyltransferase-like protein (spo2022) from2 silicibacter pomeroyi dss-3 at 1.80 a resolution
|
| Resolution | 1.80 Å |
|
 |
|   |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
|
|
70 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
80 | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|  |  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
| Query Sequence |   |
L | G | G | A | G | H | A | L | Y | L | L | N | Q | L | N | D | D | G | R | L | I | A | I | D | Q | D | Q | T | A | I | D | N | A | K | E | V | L | K | D | H | L | . |
. |
. |
. |
H | K | V | T | F | V | H | S | N | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | E | L | T | Q | I |
| Query Conservation |   |
  |
|   |
|
|
|
|   |   |
|
|   |   |
|   |
|   |
|   |
|
|
|
|
|   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   | . | . | . | . |   |
|
|   |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|
|   |
|
|   |   |   |
|   |   | . | . |   |   |   |   |
|   |
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
| Template Sequence |   |
Y | G | S | G | G | S | T | V | V | A | A | E | L | . |
. |
P | G | K | H | V | T | S | V | E | S | D | R | A | W | A | R | X | X | K | A | W | L | A | A | N | P | P | A | E | G | T | E | V | N | I | V | W | T | D | I | G | P | T | G | D | W | G | H | P | V | S | D | A | K | W | R | S | Y | P | D | Y | P | L | A | V |
| Template Known Secondary structure |   |
 | S |
| S |  |  |  |  |  |  |  | T | S | . | . | T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| T | T |
|  |  |  |  |  |  |
|
|
| S | S | B |
| G | G | G |
| B | S | S | S | T | T | G | G | G | T | T |  |  |  |  | G | G |
| Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
|   |
|   |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
| Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | K | D | L | N | I | E | K | V | D | G | I | Y | Y | D |
| Query Conservation |   |
|   |   |   |   |
|   |   |
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
| Template Sequence |   |
W | R | T | E | G | F | R | H | P | D | V | V | L | V | D |
| Template Known Secondary structure |   |
G | G |
| T | T |
|
|
|
| S |  |  |  |  |
|
| Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|