Job Description P60393 Confidence 97.81% Date Tue Jul 17 17:05:11 BST 2012 Rank 275 Aligned Residues 82 % Identity 16% Template c3adnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from e. coli. Resolution 2.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.							70	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.
Query Sequence		M	F	H	H	I	S	V	M	L	N	E	T	I	D	Y	L	N	V	K	E	N	G	V	Y	I	D	C	T	L	G	G	A	G	H	A	L	Y	L	L	N	Q	L	N	D	D	G	R	L	I	A	I	D	Q	D	Q	T	A	I	D	N	A	K	E	V	L	K	D	H	L	.	.	.	.	.	.	H	K	V	T	F
Query Conservation																																																																							.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																									.																													.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.																									.
Template Sequence		M	M	T	H	V	P	L	L	.	.	.	.	.	.	.	.	A	H	G	H	A	K	H	V	L	I	I	G	G	G	D	G	A	M	L	R	E	V	T	R	.	H	K	N	V	E	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	H	N	A	G	S	Y	D	D	P	R	F	K	L
Template Known Secondary structure										.	.	.	.	.	.	.	.		S	S									S			S	S							T	T	.		T	T									S												S					T	T		T	T		T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.																									.
Template SS confidence
		66	.	.	.	70	.	.	.									.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	S	N	F	R	E	L	T	Q	I	L	K	D	L	N	I	E	K	V	D	G	I	Y	Y	D	L
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	V	N	.	.	.	.	.	.	.	.	.	.	Q	T	S	Q	T	F	D	V	I	I	S	D	C
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140											.	.	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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