 |
| Job Description | P60393 | | Confidence | 98.59% | Date | Tue Jul 17 17:05:11 BST 2012 |
| Rank | 179 | Aligned Residues | 102 |
| % Identity | 16% | Template | c2qe6B_ |
| PDB info |
PDB header:transferase | Chain: B: PDB Molecule:uncharacterized protein tfu_2867; |
PDBTitle: crystal structure of a putative methyltransferase (tfu_2867) from2 thermobifida fusca yx at 1.95 a resolution
|
| Resolution | 1.95 Å |
|
 |
|   |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
. | . | . | . | . | . | . | . | 30 | |
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
| . |
|  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | N | E | T | I | D | Y | L | N | V | K | E | N | . |
G | V | Y | I | D | C | T | L | G | . |
. |
G | A | G | H | A | L | Y | L | L | N | Q | L | N | D | D | G | R | L | I | A | I | D | Q | D | Q | T | A | I | D | N | A | K | E | V | L | K | D | H | L | H | K | V | T | F | V | H | S | N | F | R | E | L | T | Q | I |
| Query Conservation |   |
|   |
|
|
|   |   |
|   |   |   |   |   | . |   |   |
|
|
|   |
|   |
| . | . |   |
|
|
|
|   |   |
|
|   |   |
|   |
|   |
|   |
|
|
|
|
|   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|
|
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |   |
|   |
|
|
|
|   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |   | . |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|
| Template Sequence |   |
L | V | R | G | V | R | F | L | A | G | E | A | G | I | S | Q | F | L | D | L | G | S | G | L | P | T | V | Q | N | T | H | E | V | A | Q | S | V | N | P | D | A | R | V | V | Y | V | D | I | D | P | X | V | L | T | H | G | R | A | L | L | A | K | D | P | . |
N | T | A | V | F | T | A | D | V | R | D | P | E | Y | I |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | T |
|
|
|  |  |  |  |  | T |
|
| S |
|
| S | S |
|  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | . | T |  |  |  |  |  |
|
| T | T |
|  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
|   |
|   |   |
86 | |
|
|
|
|
|
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
| Predicted Secondary structure |   |
 | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | . |
. |
. |
. |
. |
. |
K | D | L | N | I | E | K | V | D | G | I | Y | Y | D | L | G | V | S | S | P | Q | L | D | I | P | E | R |
| Query Conservation |   |
| . | . | . | . | . | . |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |
|
| Alig confidence |   |
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|
|
|   |   |   | . | . |
|
|
|   |
|   |
|   |   |   |
| Template Sequence |   |
L | N | H | P | D | V | R | R | X | I | D | F | S | R | P | A | A | I | X | L | V | G | . |
. |
X | L | H | Y | L | S | P | D | V | V |
| Template Known Secondary structure |   |
 | T | S |  |  |  |  |  |  |
|
| T | T | S |
|
|  |  |  |  | T | T | . | . | T | G | G | G | S |
| T | T | T |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
. | . | . | . | . | 170 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|