Job Description P60393 Confidence 97.47% Date Tue Jul 17 17:05:11 BST 2012 Rank 293 Aligned Residues 84 % Identity 19% Template c2px2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:genome polyprotein [contains: capsid protein c PDBTitle: crystal structure of the murray valley encephalitis virus2 ns5 2'-o methyltransferase domain in complex with sah3 (monoclinic form 1) Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																.	.	.	.	.	.																.
Query SS confidence																																																.	.	.	.	.	.																.
Query Sequence		L	N	E	T	I	D	Y	L	N	V	K	E	N	G	V	Y	I	D	C	T	L	G	G	A	G	H	A	L	Y	L	L	N	Q	L	N	D	D	G	R	L	I	A	I	D	Q	D	.	.	.	.	.	.	Q	T	A	I	D	N	A	K	E	V	L	K	D	H	L	.	H	K	V	T	F	V	H	S	N	F	R	E
Query Conservation																																																.	.	.	.	.	.																.
Alig confidence																																			.													.	.	.	.	.	.				.	.	.	.	.	.	.						.									.	.	.	.
Template Conservation																																			.																						.	.	.	.	.	.	.															.	.	.	.
Template Sequence		L	R	W	L	V	E	R	R	F	V	Q	P	I	G	K	V	V	D	L	G	C	G	R	G	G	W	S	Y	Y	A	A	T	M	.	K	N	V	Q	E	V	R	G	Y	T	K	G	G	P	G	H	E	E	P	M	L	.	.	.	.	.	.	.	M	Q	S	Y	G	W	N	I	V	T	M	K	S	G	.	.	.	.
Template Known Secondary structure								T	T	S											T		T	T	S							T	T	S	.	T	T											S	T	T	S						.	.	.	.	.	.	.			S	T	T	G	G	G						S	.	.	.	.
Template Predicted Secondary structure																																			.																						.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	Q	I	L	K	D	L	N	I	E	K	V	D	G	I	Y	Y	D	L	G	V	S	S	P
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	V	D	V	F	Y	K	P	S	E	I	S	D	T	L	L	C	D	I	G	E	S	S	P
Template Known Secondary structure		.	.			G	G	G	S						S											S
Template Predicted Secondary structure		.	.
Template SS confidence
				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions