Job Description P60393 Confidence 98.37% Date Tue Jul 17 17:05:11 BST 2012 Rank 217 Aligned Residues 87 % Identity 20% Template c2pssC_ PDB info PDB header:transferase Chain: C: PDB Molecule:spermidine synthase; PDBTitle: the structure of plasmodium falciparum spermidine synthase in its apo-2 form Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.
Query Sequence		M	F	H	H	I	S	V	M	L	N	E	T	I	D	Y	L	N	V	K	E	N	G	V	Y	I	D	C	T	L	G	G	A	G	H	A	L	Y	L	L	N	Q	L	N	D	D	G	R	L	I	A	I	D	Q	D	Q	T	A	I	D	N	A	K	E	V	L	K	D	H	L	H	.	.	.	.	.	K	V	T	F	V
Query Conservation																																																																								.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																									.																														.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.																									.
Template Sequence		M	M	T	H	V	P	M	T	.	.	.	.	.	.	.	.	V	S	K	E	P	K	N	V	L	V	V	G	G	G	D	G	G	I	I	R	E	L	C	K	.	Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N	V	F
Template Known Secondary structure										.	.	.	.	.	.	.	.		S	S	S										T	T									T	.		T	T									S																	G	G	G	G	S	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.																									.
Template SS confidence
		105	.	.	.	.	110	.	.									.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	N	F	R	E	L	T	Q	I	L	K	D	L	N	I	E	K	V	D	G	I	Y	Y	D
Query Conservation
Alig confidence									.	.	.	.
Template Conservation									.	.	.	.
Template Sequence		I	E	D	A	S	K	F	.	.	.	.	L	E	N	V	T	N	T	Y	D	V	I	I	V	D
Template Known Secondary structure			S						.	.	.	.		T	T			S
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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