Job Description P60393 Confidence 79.69% Date Tue Jul 17 17:05:11 BST 2012 Rank 377 Aligned Residues 68 % Identity 18% Template c2g1uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution Resolution 1.50 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		L	G	G	A	G	H	A	L	Y	L	L	N	Q	L	N	D	D	G	.	R	L	I	A	I	D	Q	D	Q	T	A	I	D	N	A	K	E	V	L	K	D	H	L	H	K	V	T	F	V	H	S	N	F	R	E	L	T	Q	I	L	K	D	L	N	I	E	K	V	D	G	I	Y	Y	D	L	G
Query Conservation																				.
Alig confidence																				.																			.	.	.	.	.													.
Template Conservation																																							.	.	.	.	.													.
Template Sequence		F	G	C	G	R	L	G	S	L	I	A	N	L	A	S	S	S	G	H	S	V	V	V	V	D	K	N	E	Y	A	F	H	R	L	N	S	E	.	.	.	.	.	F	S	G	F	T	V	V	G	D	A	A	E	.	F	E	T	L	K	E	C	G	M	E	K	A	D	M	V	F	A	F	T	N
Template Known Secondary structure					S													T	T								S		G	G	G	G	G	G	S		T	T	.	.	.	.	.			S					S		T	T	S	.						T	T	T	G	G	G		S						S	S
Template Predicted Secondary structure																																							.	.	.	.	.													.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions