Job Description P60393 Confidence 93.59% Date Tue Jul 17 17:05:11 BST 2012 Rank 346 Aligned Residues 66 % Identity 17% Template c2fy8A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:calcium-gated potassium channel mthk; PDBTitle: crystal structure of mthk rck domain in its ligand-free gating-ring2 form Resolution 2.79 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	G	A	G	H	A	L	Y	L	L	N	Q	L	N	D	D	G	R	L	I	A	I	D	Q	D	Q	T	A	I	D	N	A	K	E	V	L	K	D	H	L	H	K	V	T	F	V	H	S	N	F	R	E	L	T	Q	I	L	K	D	L	N	I	E	K	V	D	G	I	Y	Y	D	L	G
Query Conservation
Alig confidence																	.																				.	.	.	.	.	.													.
Template Conservation																	.																				.	.	.	.	.	.													.
Template Sequence		C	G	W	S	E	S	T	L	E	C	L	R	E	L	R	.	G	S	E	V	F	V	L	A	E	D	E	N	V	R	K	K	V	L	R	.	.	.	.	.	.	S	G	A	N	F	V	H	G	D	P	T	R	.	V	S	D	L	E	K	A	N	V	R	G	A	R	A	V	I	V	N	L	E
Template Known Secondary structure			S											T	S		.	G	G	G						S		T	T								.	.	.	.	.	.	T	T						S		T	T	S	.							T	T		T	T		S							S
Template Predicted Secondary structure																	.																				.	.	.	.	.	.													.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.							.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions