Job Description P60393 Confidence 97.59% Date Tue Jul 17 17:05:11 BST 2012 Rank 285 Aligned Residues 86 % Identity 20% Template c2cmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from helicobacter2 pylori Resolution 2.0 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		M	F	H	H	I	S	V	M	L	N	E	T	I	D	Y	L	N	V	K	E	N	G	V	Y	I	D	C	T	L	G	G	A	G	H	A	L	Y	L	L	N	Q	L	N	D	D	G	R	L	I	A	I	D	Q	D	Q	T	A	I	D	N	A	K	E	V	L	K	D	H	L	.	H	K	V	T	F	V	H	S	N	F
Query Conservation																																																																							.
Alig confidence										.	.	.	.	.	.	.	.																										.	.	.																										.
Template Conservation										.	.	.	.	.	.	.	.																										.	.	.
Template Sequence		L	L	A	H	M	G	G	C	.	.	.	.	.	.	.	.	T	K	K	E	L	K	E	V	L	I	V	D	G	F	D	L	E	L	A	H	Q	L	F	K	Y	.	.	.	D	T	H	I	D	F	V	Q	A	D	E	K	I	L	D	S	F	I	S	F	F	P	H	F	H	E	V	K	N	N	K	N	F	T	H	A
Template Known Secondary structure									T	.	.	.	.	.	.	.	.	T	S	S									S	S										T	T	S	.	.	.	S								S						G	G	G	T	T	T	S	T	T						T		T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.																										.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.									.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	L	T	Q	I	L	K	D	L	N	I	E	K	V	D	G	I	Y	Y	D	L
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		K	Q	L	.	.	.	.	L	D	L	D	I	K	K	Y	D	L	I	F	C	L	Q
Template Known Secondary structure		S	S	G	.	.	.	.	G	G	S											S	S
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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