Job Description P60393 Confidence 99.44% Date Tue Jul 17 17:05:11 BST 2012 Rank 17 Aligned Residues 163 % Identity 26% Template c1wxwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hypothetical protein ttha1280; PDBTitle: crystal structure of tt1595, a putative sam-dependent2 methyltransferase from thermus thermophillus hb8 Resolution 2.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		N	E	T	I	D	Y	L	N	V	K	E	N	G	V	Y	I	D	C	T	L	G	G	A	G	H	A	L	Y	L	L	N	Q	L	N	D	D	G	R	L	I	A	I	D	Q	D	Q	T	A	I	D	N	A	K	E	V	L	K	D	H	L	.	H	K	V	T	F	V	H	S	N	F	R	E	L	T	Q	I	L	K	D
Query Conservation																																																														.
Alig confidence																																		.	.	.																										.
Template Conservation																																		.	.	.
Template Sequence		R	E	N	R	L	Y	X	E	R	F	R	G	E	R	A	L	D	V	F	S	Y	A	G	G	F	A	L	H	L	A	L	G	.	.	.	F	R	E	V	V	A	V	D	S	S	A	E	A	L	R	R	A	E	E	N	A	R	L	N	G	L	G	N	V	R	V	L	E	A	N	A	F	D	L	L	R	R	L	E	K
Template Known Secondary structure								G	G	G										S		T	T	T							T	T	T	.	.	.									S															T	T			S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	I	E	K	V	D	G	I	Y	Y	D	L	G	V	S	S	P	Q	L	D	I	P	E	R	G	F	S	Y	H	H	D	A	T	L	D	M	R	M	D	Q	T	Q	E	L	T	A	Y	E	I	V	N	N	W	S	Y	E	A	L	V	K	I	F	Y	R	Y	G	E	E	K	F	S	K	Q	I	A	R	R	I	E
Query Conservation
Alig confidence				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	.	E	R	F	D	L	V	V	L	D	P	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		276	.		.	.	280	.	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		A	H	R	E	Q	Q	P	I	T	T	T	L	E	L	V	D	I	I	K	E	G	I	P	A	K	A	R	R	K	G	G	H	P	A	K	R	V	F	Q	A	L	R	I	A	V	N	D	E	L	S	A	F	E	D	S	I	E	Q	A	I	E	L	V	K	V	D	G	R	I	S	V	I	T	F	H	S	L	E	D	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																														.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	K	G	K	K	D	V	E	R	A	Y	R	.	.	.	.	.	.	.	.	A	Y	K	E	V	N	L	R	A	I	K	L	L	K	E	G	G	I	L	A	T	A	S	C	S	H	H	X	T	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S										.	.	.	.	.	.	.	.																										S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
																															290	.	.	.	.	.	.	.	.	.	300	.	.									.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
						248	.	250	.	.	.	.	.	.	.	.	.	260	.	.							.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																.	.	.	.	.	.
Query SS confidence		.	.	.	.																.	.	.	.	.	.
Query Sequence		.	.	.	.	R	L	C	K	Q	V	F	Q	E	Y	E	K	G	P	E	.	.	.	.	.	.	V	P	R	G	L	P	V	I	P	E	A	Y	T	P	K	L
Query Conservation		.	.	.	.																.	.	.	.	.	.
Alig confidence		.	.	.	.																.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	F	Y	A	X	V	A	E	A	A	Q	D	A	H	R	L	L	R	V	V	E	K	R	G	Q	P	F	D	H	P	V	L	L	N	H	P	E	T	H	Y
Template Known Secondary structure															T	T													T	T	S				T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions