Job Description P60393 Confidence 100.00% Date Tue Jul 17 17:05:11 BST 2012 Rank 2 Aligned Residues 278 % Identity 49% Template c1wg8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:predicted s-adenosylmethionine-dependent PDBTitle: crystal structure of a predicted s-adenosylmethionine-2 dependent methyltransferase tt1512 from thermus3 thermophilus hb8. Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	S	V	M	L	N	E	T	I	D	Y	L	N	V	K	E	N	G	V	Y	I	D	C	T	L	G	G	A	G	H	A	L	Y	L	L	N	Q	L	N	D	D	G	R	L	I	A	I	D	Q	D	Q	T	A	I	D	N	A	K	E	V	L	K	D	H	L	H	K	V	T	F	V	H	S	N	F	R	E	L	T
Query Conservation
Alig confidence																																								.	.	.																								.	.	.
Template Conservation																																								.	.	.																								.	.	.
Template Sequence		H	V	P	V	L	Y	Q	E	A	L	D	L	L	A	V	R	P	G	G	V	Y	V	D	A	T	L	G	G	A	G	H	A	R	G	I	L	E	R	.	.	.	G	G	R	V	I	G	L	D	Q	D	P	E	A	V	A	R	A	K	G	L	H	L	P	.	.	.	G	L	T	V	V	Q	G	N	F	R	H	L	K
Template Known Secondary structure					T	T									T			T	T						T	T		T	T	S									T	.	.	.	T								S											T	T		T	.	.	.	T						S		G	G	G
Template Predicted Secondary structure																																								.	.	.																								.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	L	K	D	L	N	I	E	K	V	D	G	I	Y	Y	D	L	G	V	S	S	P	Q	L	D	I	P	E	R	G	F	S	Y	H	H	D	A	T	L	D	M	R	M	D	Q	T	Q	E	L	T	A	Y	E	I	V	N	N	W	S	Y	E	A	L	V	K	I	F	Y	R	Y	G	E	E	K	F	S	K	Q	I
Query Conservation
Alig confidence																																																	.
Template Conservation																																																	.
Template Sequence		R	H	L	A	A	L	G	V	E	R	V	D	G	I	L	A	D	L	G	V	S	S	F	H	L	D	D	P	S	R	G	F	S	Y	Q	K	E	G	P	L	D	M	R	M	G	L	E	.	G	P	T	A	K	E	V	V	N	R	L	P	L	E	A	L	A	R	L	L	R	E	L	G	E	E	P	Q	A	Y	R	I
Template Known Secondary structure							T	T		S										S							S		G	G	G				S	S	S			B	S				S	S	S		.	S										S																T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	R	I	E	A	H	R	E	Q	Q	P	I	T	T	T	L	E	L	V	D	I	I	K	E	G	I	P	A	K	A	R	R	K	G	G	H	P	A	K	R	V	F	Q	A	L	R	I	A	V	N	D	E	L	S	A	F	E	D	S	I	E	Q	A	I	E	L	V	K	V	D	G	R	I	S	V	I	T	F	H
Query Conservation
Alig confidence																														.	.	.
Template Conservation																														.	.	.
Template Sequence		A	R	A	I	V	A	A	R	E	K	A	P	I	E	T	T	T	Q	L	A	E	I	V	R	K	A	V	G	.	.	.	F	R	R	A	G	H	P	A	R	K	T	F	Q	A	L	R	I	Y	V	N	D	E	L	N	A	L	K	E	F	L	E	Q	A	A	E	V	L	A	P	G	G	R	L	V	V	I	A	F	H
Template Known Secondary structure												S				B														.	.	.			S	S	S		S	T												T	T																												S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	E	D	R	L	C	K	Q	V	F	Q	E	Y	E	K	G	P	E	V	P	R	G	L	P	V	I	P	E	A	Y	T	P	K	L	K	R	V	N	R	K	P	I	T	A	T	E	E	D	L	D	D	N	N	R	A	R	S	A	K	L	R	V	A	E	I	L
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	E	D	R	V	V	K	R	F	L	R	E	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	V	L	T	K	K	P	L	V	P	S	E	K	E	A	A	Q	N	P	R	A	R	S	A	K	L	R	A	A	E	K	E
Template Known Secondary structure														T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S		S	S		B											T	T	T	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250																				.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions