Job Description P60393 Confidence 100.00% Date Tue Jul 17 17:05:11 BST 2012 Rank 1 Aligned Residues 286 % Identity 42% Template c1m6yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:s-adenosyl-methyltransferase mraw; PDBTitle: crystal structure analysis of tm0872, a putative sam-2 dependent methyltransferase, complexed with sah Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	I	S	V	M	L	N	E	T	I	D	Y	L	N	V	K	E	N	G	V	Y	I	D	C	T	L	G	G	A	G	H	A	L	Y	L	L	N	Q	L	N	D	D	G	R	L	I	A	I	D	Q	D	Q	T	A	I	D	N	A	K	E	V	L	K	D	H	L	H	K	V	T	F	V	H	S	N	F	R	E	L
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		R	H	I	P	V	X	V	R	E	V	I	E	F	L	K	P	E	D	E	K	I	I	L	D	C	T	V	G	E	G	G	H	S	R	A	I	L	E	H	C	.	P	G	C	R	I	I	G	I	D	V	D	S	E	V	L	R	I	A	E	E	K	L	K	E	F	S	D	R	V	S	L	F	K	V	S	Y	R	E	A
Template Known Secondary structure		S				T	T												T	T						T	T		T	T	S											.	T	T								S												T	G	G	G	T	T	T								G	G	G
Template Predicted Secondary structure																																										.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		T	Q	I	L	K	D	L	N	I	E	K	V	D	G	I	Y	Y	D	L	G	V	S	S	P	Q	L	D	I	P	E	R	G	F	S	Y	H	H	D	A	T	L	D	M	R	M	D	Q	T	Q	E	L	T	A	Y	E	I	V	N	N	W	S	Y	E	A	L	V	K	I	F	Y	R	Y	G	E	E	.	K	F	S	K
Query Conservation																																																																													.
Alig confidence																																																																													.
Template Conservation
Template Sequence		D	F	L	L	K	T	L	G	I	E	K	V	D	G	I	L	X	D	L	G	V	S	T	Y	Q	L	K	G	E	N	R	G	F	T	F	E	R	E	E	P	L	D	X	R	X	D	L	E	S	E	V	T	A	Q	K	V	L	N	E	L	P	E	E	E	L	A	R	I	I	F	E	Y	G	E	E	K	R	F	A	R
Template Known Secondary structure								T	T		S										S								T	S		S		S	S	S	S	S			B	S				S	S	T	T	S	S										S												T	T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		Q	I	A	R	R	I	E	A	H	R	E	Q	Q	P	I	T	T	T	L	E	L	V	D	I	I	K	E	G	I	P	A	K	A	.	R	R	K	G	G	H	P	A	K	R	V	F	Q	A	L	R	I	A	V	N	D	E	L	S	A	F	E	D	S	I	E	Q	A	I	E	L	V	K	V	D	G	R	I	S	V	I
Query Conservation																																			.
Alig confidence												.	.	.																					.
Template Conservation												.	.	.
Template Sequence		R	I	A	R	K	I	V	E	N	R	.	.	.	P	L	N	T	T	L	D	L	V	K	A	V	R	E	A	L	P	S	Y	E	I	R	R	R	K	R	H	F	A	T	K	T	F	Q	A	I	R	I	Y	V	N	R	E	L	E	N	L	K	E	F	L	K	K	A	E	D	L	L	N	P	G	G	R	I	V	V	I
Template Known Secondary structure										T		.	.	.	S			B												S									S	S		T	T													T												G	G	G	G
Template Predicted Secondary structure												.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	H	S	L	E	D	R	L	C	K	Q	V	F	Q	E	Y	E	K	G	P	E	V	P	R	G	L	P	V	I	P	E	A	Y	T	P	K	L	K	R	V	N	R	K	P	I	T	A	T	E	E	D	L	D	D	N	N	R	A	R	S	A	K	L	R	V	A	E	I	L
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	H	S	L	E	D	R	I	V	K	E	T	F	R	N	S	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	I	L	T	E	K	P	V	R	P	S	E	E	E	I	R	E	N	P	R	A	R	S	G	R	L	R	A	A	E	R	I
Template Known Secondary structure			S	S															S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S		S	S		B											G	G	G	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.																			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions