Job Description P0C0V7 Confidence 52.01% Date Tue Jul 17 17:05:08 BST 2012 Rank 49 Aligned Residues 67 % Identity 15% Template c3qayC_ PDB info PDB header:lyase Chain: C: PDB Molecule:endolysin; PDBTitle: catalytic domain of cd27l endolysin targeting clostridia difficile Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		175	.	.	.	.	180	.	.	.	.	.	.	.	.																						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	K	I	A	L	D	G	A	N	G	S	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	A	P	F	L	F	G	D	L	E	A	D	T	E	T	I	G	C	S	P	D	G	Y	N	I	N	E	K	C	G	S	T	H	P	E	K	L	A	E	K	V	V	E	T
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		H	M	K	I	C	I	T	V	G	H	S	I	L	K	S	G	A	C	T	S	A	D	G	V	V	N	E	Y	Q	Y	N	K	S	L	A	P	V	L	A	D	T	F	R	K	E	G	H	K	V	D	V	I	I	C	P	E	K	Q	F	K	T	K	N	E	.	.	.	.	E	K	S	Y	K	I	P	R	V	N	S	G
Template Known Secondary structure													B		T	T	S		B		S		B	S	S	S	B																			T	T										S	S			S	S	T			.	.	.	.										T	T	T
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	D	F	G	L	A	F	D	G	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	D	L	L	I	E	L	H	L	N	A
Template Known Secondary structure		T		S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions