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Job DescriptionP0C0V7
Confidence100.00%DateTue Jul 17 17:05:08 BST 2012
Rank11Aligned Residues443
% Identity21%Templatec1kfiA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:phosphoglucomutase 1; PDBTitle: crystal structure of the exocytosis-sensitive2 phosphoprotein, pp63/parafusin (phosphoglucomutase) from3 paramecium
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70...... ...80.
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Query Sequence  FGTDGVRGVANQELTPELAFKLGRYGGYVLAHNKGEKHPRVLVGRDTRVSGEMLESALIAGLISIGAEVMRL. . . GIIST
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Template Sequence  PGTSGLRKKVSEATQPNYLENFVQSIFNTLRKDELKPKNVLFVGGDGRYFNRQAIFSIIRLAYANDISEVHVGQAGLMST
Template Known Secondary structure 
BTTBTSTTS
GGGSSSS



TTTT
SGGG
B
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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   82.......90.. .......100......... 110.........120.........130.........140.........150..
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Query Sequence  PGVAYLTRDMG. . . . . AELGVMISASHNPVADN. . . . GIKFFGSDGFKLSDEQENEIEALLDQENPELPRPVGNDIVHYS
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Template Sequence  PASSHYIRKVNEEVGNCIGGIILTASHNPGGKEHGDFGIKFNVRTGAPAPEDFTDQIYTHTTKIKEYLTVDYEFEKHINL
Template Known Secondary structure  S



TTS

STTT

TTSSB

TT





GGGT

T
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   101........110.........120.........130.........140.........150.........160.........170.........180
 
   153.. ....160.........170 .........180.........190..... ....200...
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Query Sequence  DYF. . . . . . . . . . . . . . . . . . . . EGAQKYLSYLKSTVD. . . . . . . VNFEGLKIALDGANGSTSSLAPFLF. GDLEADTE.
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Template Sequence  DQIGVYKFEGTRLEKSHFEVKVVDTVQDYTQLMQKLFDFDLLKGLFSNKDFSFRFDGMHGVAGPYAKHIFGTLLGCSKES
Template Known Secondary structure  TS
B

TT


SSS
T
TT


TTSTTTTT


GGG
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   181........190.........200.........210.........220.........230.........240.........250.........260
 
   204.....210.... .....220.........230 .........240.........250.........260.........270....
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Query Sequence  TIGCSPDGYNI. . NEKCGSTHPEKLAEKV. . . . . . . VETESDFGLAFDGDGDRIIAVDENGQIVDGDQIMFIIGQEMHKN
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Template Sequence  LLNCDPSEDFGGGHPDPNLTYAHDLVELLDIHKKKDVGTVPQFGAACDGDADRNMILGRQFFVTPSDSLAVIAANANLIF
Template Known Secondary structure  S
S

TTGGGS



STTTTTTTT

S
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S
TTS
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TS
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   261........270.........280.........290.........300.........310.........320.........330.........340
 
   275....280.........290.........300.........310.........320.........330.........340.........350....
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Query Sequence  QELNNDMIVSTVMSNLGFYKALEQEGIKSNKTKVGDRYVVEEMRRGNYNLGGEQSGHIVMMDYNTTGDGLLTGIQLASVI
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Template Sequence  KNGLL. GAARSMPTSGALDKVAAKNGIKLFETPTGWKFFGNLMDAGLINLCGEESFGT. GSNHIREKDGIWAVLAWLTIL
Template Known Secondary structure  TT


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TTS
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   341.... ....350.........360.........370.........380.........390....... ..400.........410........
 
   355.... 360.........370 .........380.........390......
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Query Sequence  KMTGK. . . . . . SLSELAGQMKK. . . . . YPQSLINVRVTDKYRVEENVDVKEVM. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AHKNKNTDHFVTVEEIVTQYWQQFGRNYYSRYDYEQVDSAGANKMMEHLKTKFQYFEQLKQGNKADIYDYVDPVDQSVSK
Template Known Secondary structure  TSS
SS




TTTTSTT



TTT


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   419420.........430.........440.........450.........460.........470.........480.........490........
 
   397..400.........410......... 420.........430.. .......440.........
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Query Sequence  . TKVEVEMNGEGRILVRPSGTEPL. . . VRVMVEAATDEDA. . . . ERFAQQIADVVQDKMGL
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Template Sequence  NQGVRFVFGDGSRIIFRLSGTGSVGATIRIYFEQFEQQQIQHETATALANIIKLGLEISDI
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TTS

SS
SSSSS


S

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   499500.........510.........520.........530.........540.........550.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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