 |
| Job Description | P0C0V7 | | Confidence | 31.55% | Date | Tue Jul 17 17:05:08 BST 2012 |
| Rank | 79 | Aligned Residues | 81 |
| % Identity | 11% | Template | c1bmtB_ |
| PDB info |
PDB header:methyltransferase | Chain: B: PDB Molecule:methionine synthase; |
PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase
|
| Resolution | 3.00 Å |
|
 |
|   |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | L | A | F | K | L | G | R | Y | G | G | Y | V | L | A | H | N | K | G | E | K | H | P | . |
. |
R | V | L | V | G | R | D | T | R | V | S | G | E | M | L | E | S | A | L | I | A | G | L | I | S | I | G | A | E | V | M | R | L | G | . |
I | I | S | T | P | G | V | A | Y | L | T | R | D | M | G | A | E | L | G | V |
| Query Conservation |   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . |   |
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
| . |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |
|
|   |
|
|
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   | . |
|
| Template Sequence |   |
R | V | M | K | Q | A | V | A | Y | L | E | P | F | I | E | A | S | K | E | Q | G | K | T | N | G | K | M | V | I | A | T | V | K | G | D | V | H | D | I | G | K | N | I | V | G | V | V | L | Q | C | N | N | Y | E | I | V | D | L | G | V | M | V | P | A | E | K | I | L | R | T | A | K | E | V | N | A | D | L | . |
I |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
| S |
|
|
| S |
|  |  |  |  |  |  |
| T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  | . |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
723 | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | |
. |
|   |
|   |   |
98 | . | 100 | . | . |
| Predicted Secondary structure |   |
 |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
| Query Sequence |   |
M | I | S | A | S |
| Query Conservation |   |
  |
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
| Template Conservation |   |
|
|
|   |
|
| Template Sequence |   |
G | L | S | G | L |
| Template Known Secondary structure |   |
 |  |  |
|
|
| Template Predicted Secondary structure |   |
 |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|   |   |
802 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|