Job Description P0A0H0 Confidence 100.00% Date Tue Jul 17 17:05:06 BST 2012 Rank 2 Aligned Residues 123 % Identity 71% Template d2qall1 SCOP info OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Resolution 3.21

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	I	N	Q	L	V	R	K	P	R	Q	S	K	I	K	K	S	D	S	P	A	L	N	K	G	F	N	S	K	K	K	K	F	T	D	L	N	S	P	Q	K	R	G	V	C	T	R	V	G	T	M	T	P	K	K	P	N	S	A	L	R	K	Y	A	R	V	R	L	S	N	N	I	E	I	N	A	Y	I	P
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	V	N	Q	L	V	R	K	P	R	A	R	K	V	A	K	S	N	V	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	A	C	P	Q	K	R	G	V	C	T	R	V	Y	T	T	T	P	K	K	P	N	S	A	L	R	K	V	C	R	V	R	L	T	N	G	F	E	V	T	S	Y	I	G
Template Known Secondary structure										S										S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T		S																S	S			S									B	T	T	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.														.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	G	H	N	L	Q	E	H	S	V	V	L	V	R	G	G	R	V	K	D	L	P	G	V	R	Y	H	I	V	R	G	A	L	D	T	S	G	V	D	G	R	R	Q	G	R	S	L	Y	G	T	K	K	P	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	G	H	N	L	Q	E	H	S	V	I	L	I	R	G	G	R	V	K	D	L	P	G	V	R	Y	H	T	V	R	G	A	L	D	C	S	G	V	K	D	R	K	Q	A	R	S	K	Y	G	V	K	R	P	K	A
Template Known Secondary structure		S	S						S	S										B	T	T	B	T	T				B	B		T	T	S	T	T					T	T			S	S		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions