Job Description P0A0H0 Confidence 2.89% Date Tue Jul 17 17:05:06 BST 2012 Rank 72 Aligned Residues 38 % Identity 18% Template c3pgwB_ PDB info PDB header:splicing/dna/rna Chain: B: PDB Molecule:sm b; PDBTitle: crystal structure of human u1 snrnp Resolution 4.40 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.								.	.	.	.	.	90																				.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	L	R	K	Y	A	R	V	R	L	S	N	N	I	E	I	N	A	Y	I	P	G	I	G	.	.	.	.	.	.	.	H	N	L	Q	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	V	L	V	R	G
Query Conservation																											.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	H	I	D	Y	R	M	R	C	I	L	Q	D	G	R	I	F	I	G	T	F	K	A	F	D	K	H	M	N	L	I	L	C	D	C	D	E	F	R	K	I	K	P	K	N	S	K	Q	A	E	R	E	E	K	R	V	L	G	L	V	L	L	R	G
Template Known Secondary structure			T	T	T							B	T	T	S												T	T							S				B					S	S				T	T						S									G
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions