Job Description P0A0H0 Confidence 100.00% Date Tue Jul 17 17:05:06 BST 2012 Rank 6 Aligned Residues 105 % Identity 30% Template c1s1hL_ PDB info PDB header:ribosome Chain: L: PDB Molecule:40s ribosomal protein s23; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																																.															.	.														.	.	.	.
Query SS confidence																																																.															.	.														.	.	.	.
Query Sequence		N	K	G	F	N	S	K	K	K	K	F	T	D	L	N	S	P	Q	K	R	G	V	C	T	R	V	G	T	M	T	P	K	K	P	N	S	A	L	R	K	Y	A	R	V	R	L	.	S	N	N	I	E	I	N	A	Y	I	P	G	I	G	.	.	H	N	L	Q	E	H	S	V	V	L	V	R	G	.	.	.	.
Query Conservation																																																.															.	.														.	.	.	.
Alig confidence																																																.															.	.														.	.	.	.
Template Conservation
Template Sequence		K	R	L	L	G	T	A	F	K	S	S	P	F	G	G	S	S	H	A	K	G	I	V	L	E	K	L	G	I	E	S	K	Q	P	N	S	A	I	R	K	C	V	R	V	Q	L	I	K	N	G	K	K	V	T	A	F	V	P	N	D	G	C	L	N	F	V	D	E	N	D	E	V	L	L	A	G	F	G	R	K
Template Known Secondary structure										S				S	T	T		S															S	T	T													S	S	S										S			S	S		S			T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
			98	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.																.	.
Query SS confidence		.																.	.
Query Sequence		.	G	R	V	K	D	L	P	G	V	R	Y	H	I	V	R	.	.	G	A	L	D	T	S	G	V	D	G	R	R	Q	G	R	S	L	Y	G	T	K	K	P	K	N
Query Conservation		.																.	.
Alig confidence		.																.	.													.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.
Template Sequence		G	K	A	K	G	D	I	P	G	V	R	F	K	V	V	K	V	S	G	V	S	L	L	A	L	W	K	E	K	K	.	.	.	.	.	.	.	.	E	K	P	R	S
Template Known Secondary structure				B	T	T	T	B	T	T					B		T	T	T	T		T	T					T	T			.	.	.	.	.	.	.	.	S	G	G	G
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140									.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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