Job Description P72358 Confidence 3.28% Date Tue Jul 17 17:05:13 BST 2012 Rank 37 Aligned Residues 115 % Identity 10% Template c3tdsC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:formate/nitrite transporter; PDBTitle: crystal structure of hsc f194i Resolution 1.98 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	K	Q	Q	K	D	A	S	K	P	A	H	F	F	H	Q	V	I	V	I	A	L	V	L	F	V	S	K	I	I	E	S	F	M	P	I	P	M	P	A	S	V	I	G	L	V	L	L	F	V	L	L	C	T	G	A	V	K	L	G	E	V	E	K	V	G	T	T	L	T	N	N	I	G	L	L	F	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	K	I	N	L	L	N	T	S	K	V	K	Y	L	V	S	S	A	F	A	G	L	Y	V	G	I	G	I	L	L	I	F	T	I	G	G	L	L	T	D	A	G	S	P	M	T	K	I	V	M	G	L	S	F	A	I	A	L	S	L	V	I	M	T	G	T	E	L	F	T	G	N	N	M	V	M	S	A	G
Template Known Secondary structure																																												T		S									T		T										T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	I	S	V	V	N	S	L	G	V	I	S	Q	A	P	F	L	I	I	G	L	I	I	V	S	T	I	L	L	L	I	C	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	N	K	G	V	S	I	K	D	T	S	K	I	W	A	Y	S	W	V	G	N	L	I	G	A	L	V	L	G	I	I	F	V	G
Template Known Secondary structure				T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions