Job Description P72358 Confidence 5.63% Date Tue Jul 17 17:05:13 BST 2012 Rank 12 Aligned Residues 131 % Identity 11% Template c3kcvG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:probable formate transporter 1; PDBTitle: structure of formate channel Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	P	A	H	F	F	H	Q	V	I	V	I	A	L	V	L	F	V	S	K	I	I	E	S	F	M	P	I	P	M	P	A	S	V	I	G	L	V	L	L	F	V	L	L	C	T	G	A	V	K	L	G	E	V	E	K	V	G	T	T	L	T	N	N	I	G	L	L	F	V	P	A	G	I	S	V	V	N	S
Query Conservation
Alig confidence																																																																				.
Template Conservation																																																																				.
Template Sequence		K	H	P	L	K	T	F	Y	L	A	I	T	A	G	V	F	I	S	I	A	F	V	F	Y	I	T	A	T	T	G	T	G	T	M	P	F	G	M	A	K	L	V	G	G	I	C	F	S	L	G	L	I	L	C	V	V	C	G	A	D	L	F	T	S	T	V	.	L	I	V	V	A	K	A	S	G	R	I	T	W
Template Known Secondary structure																														T	T		S	S	S																							T	T				T	T	T	T		.							S	T	T		S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V	I	S	Q	A	P	F	L	I	I	G	L	I	I	V	S	T	I	L	L	L	I	C	T	G	Y	V	T	Q	I	I	M	K	V	T	S	R	S	K	G	D	K	V	T	K	K	I	K	I	E	E	A	Q	A	H	D
Query Conservation
Alig confidence																														.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.
Template Sequence		G	Q	L	A	K	N	W	L	N	V	Y	F	G	N	L	V	G	A	L	L	F	V	L	L	M	W	L	S	.	.	.	.	.	.	G	E	Y	M	T	A	N	G	Q	W	G	L	N	V	L	Q	T	A	D	H	K	V	H	H
Template Known Secondary structure						T	T																							.	.	.	.	.	.	T	G	G	G	T	T	T	T													T	T
Template Predicted Secondary structure																														.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions