Job Description P0A0J0 Confidence 30.35% Date Tue Jul 17 17:05:06 BST 2012 Rank 402 Aligned Residues 83 % Identity 24% Template d1vola1 SCOP info Cyclin-like Cyclin-like Transcription factor IIB (TFIIB), core domain Resolution 2.70

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	E	I	G	E	E	M	D	L	P	A	E	K	V	R	E	I	L	K	I	A	Q	E	P	V	S	L	E	T	P	I	G	E	E	D	D	S	H	L	G	D	F	I	E	D	Q	E	A	Q	S	P	S	D	H	A	A	Y	E	L	L	K	E	Q	L	E	D	V	L	D	T	L	T	D	R	E	E	N	V	L
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	T	M	A	D	R	I	N	L	P	R	N	K	V	D	R	T	N	N	L	F	R	Q	A	Y	E	Q	K	S	L	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	N	D	A	I	A	S	A	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	A
Template Known Secondary structure									T	T																			T				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.																	.	.	.	.	.	.	160	.	.	.	.																		.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	R	F	G	L	D	D	G	R	T	R	T	L	E	E	V	G	K	V	F	G	V	T	R	E	R	I	R	Q	I	E	A	K	A	L	R	K	L	R
Query Conservation
Alig confidence						.	.	.	.
Template Conservation						.	.	.	.
Template Sequence		C	R	Q	E	.	.	.	.	G	V	P	R	T	F	K	E	I	C	A	V	S	R	I	S	K	K	E	I	G	R	C	F	K	L	I	L	K	A	L	E
Template Known Secondary structure					T	.	.	.	.	T										T	T	T		S																T	T
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		168	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions