Job Description P0A0J0 Confidence 22.13% Date Tue Jul 17 17:05:06 BST 2012 Rank 435 Aligned Residues 40 % Identity 28% Template c1mszA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding protein smubp-2; PDBTitle: solution structure of the r3h domain from human smubp-2 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	I	R	Q	A	I	T	R	A	I	A	D	Q	A	R	T	I	R	I	P	V	H	M	V	E	T	I	N	K	L	I	R	V	Q	R	Q	L	L	Q	D	L	G	R	D	P	A	P	E	E	I	G	E	E	M	D	L
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	F	R	A	M	I	V	E	F	M	A	S	K	K	M	Q	L	E	F	P	P	S	L	N	S	H	D	R	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	Q	I	A	E	E	H	G	L
Template Known Secondary structure														T		S						T	T			S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		728	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.																	.	.	760	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions