Return to main results Retrieve Phyre Job Id

Job DescriptionP60070
Confidence99.85%DateTue Jul 17 17:05:11 BST 2012
Rank5Aligned Residues105
% Identity16%Templatec3f43A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:putative anti-sigma factor antagonist tm1081; PDBTitle: crystal structure of a putative anti-sigma factor antagonist (tm1081)2 from thermotoga maritima at 1.59 a resolution
Resolution1.59 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40 .........50.........60.........70.........80
Predicted Secondary structure 



.










Query SS confidence 






































.







































Query Sequence  NLNIETTTQDKFYEVKVGGELDVYTVPELEEVLTPMRQD. GTRDIYVNLENVSYMDSTGLGLFVGTLKALNQNDKELYIL
Query Conservation   
 
         

 
 
 
                  .    





 
  





  
               
 
Alig confidence 






































.







































Template Conservation               

 
 
 

   
      
           




  
  





  
          
  
 
 
Template Sequence  HHXFPYKIVDDVVILXPNKELNIENAHLFKKWVFDEFLNKGYNKIFLVLSDVESIDSFSLGVIVNILKSISSSGGFFALV
Template Known Secondary structure  TTSS
TT


S

STTTTGGGT


TT




T
Template Predicted Secondary structure 
























Template SS confidence 















































































  
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions