Return to main results Retrieve Phyre Job Id

Job DescriptionP0A0G6
Confidence99.80%DateTue Jul 17 17:05:06 BST 2012
Rank8Aligned Residues77
% Identity17%Templatec4a1dG_
PDB info PDB header:ribosomeChain: G: PDB Molecule:rpl30; PDBTitle: t.thermophila 60s ribosomal subunit in complex with initiation2 factor 6. this file contains 26s rrna and proteins of3 molecule 4.
Resolution3.52 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60. ........70.........80...
Predicted Secondary structure 














.







Query SS confidence 






















































.





















Query Sequence  ARFNKQHFVVGLKETLKALKKDQVTSLIIAEDVEVYLMTRVLSQINQKNIPVSFF. KSKHALGKHVGINVNATIVALI
Query Conservation          
 
  

 


  

  




 
        
   
    

    . 
  


 
 
     
 
 

Alig confidence 






















































.





















Template Conservation 

 


 

 
   
 
 
   
 





 
        
   
    


     

 


 
 

    
 
 
 
Template Sequence  LVMRSGKATLGYKSTIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVELGTACGKYHRCSTMAIL
Template Known Secondary structure  SST



TTS
T

SS
TT
SS

S
Template Predicted Secondary structure 
























Template SS confidence 













































































   16...20.........30.........40.........50.........60.........70.........80.........90...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions