Job Description P0A0G6 Confidence 99.79% Date Tue Jul 17 17:05:06 BST 2012 Rank 15 Aligned Residues 77 % Identity 35% Template c3v7eB_ PDB info PDB header:ribosomal protein/rna Chain: B: PDB Molecule:ribosome-associated protein l7ae-like; PDBTitle: crystal structure of ybxf bound to the sam-i riboswitch aptamer Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	E	K	V	A	R	F	N	K	Q	H	F	V	V	G	L	K	E	T	L	K	A	L	K	K	D	Q	V	T	S	L	I	I	A	E	D	V	E	V	Y	L	M	T	R	V	L	S	Q	I	N	Q	K	N	I	P	V	S	F	F	K	S	K	H	A	L	G	K	H	V	G	I	N	V	N	A	T	I	V
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		S	Y	D	K	.	.	V	S	Q	A	K	S	I	I	I	G	T	K	Q	T	V	K	A	L	K	R	G	S	V	K	E	V	V	V	A	K	D	A	D	P	I	L	T	S	S	V	V	S	L	A	E	D	Q	G	I	S	V	S	M	V	E	S	M	K	K	L	G	K	A	C	G	I	E	V	G	A	A	A	V
Template Known Secondary structure						.	.		T	T		S	S				S								T	T	T				S					B	T	T	S		T	T	T	T	T	T	T	T					T	T	T						B	S		T	T					T	T	S		S	S			S
Template Predicted Secondary structure						.	.
Template SS confidence
		602	.	.	.			.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions