Job Description P0A0G6 Confidence 94.65% Date Tue Jul 17 17:05:06 BST 2012 Rank 42 Aligned Residues 75 % Identity 21% Template c3mcaB_ PDB info PDB header:translation regulation/hydrolase Chain: B: PDB Molecule:protein dom34; PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay Resolution 2.74 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.								40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																		.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.
Query Sequence		R	F	N	K	Q	H	F	V	V	G	L	K	E	T	L	K	A	L	K	K	D	Q	V	T	S	L	I	I	A	E	D	V	.	.	.	.	.	.	.	E	V	Y	L	M	T	R	V	L	S	Q	I	N	Q	K	N	I	P	V	S	F	F	K	S	K	H	A	L	G	K	H	V	G	I	N	V	N	A	T	I	V
Query Conservation																																		.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.																																	.					.
Template Conservation																																																																									.					.
Template Sequence		N	E	D	D	R	K	A	W	Y	G	P	N	H	V	L	K	A	F	E	L	G	A	I	G	E	L	L	I	S	D	S	L	F	R	S	S	D	I	A	T	R	K	K	W	V	S	L	V	E	G	V	K	E	I	N	C	P	V	Y	I	F	S	S	L	H	E	S	G	K	Q	L	.	D	L	L	S	.	G	I	A
Template Known Secondary structure					T	T	S				S										T	T		B	S	S						T	T				S																		T	T								T	T	S							.			T	T	.	S
Template Predicted Secondary structure																																																																									.					.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360		.	.	.
		81	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	L	T
Template Known Secondary structure				B	S
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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