Job Description P0A0G6 Confidence 99.77% Date Tue Jul 17 17:05:06 BST 2012 Rank 18 Aligned Residues 78 % Identity 21% Template c2xznU_ PDB info PDB header:ribosome Chain: U: PDB Molecule:ribosomal protein l7ae containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.												.	.
Predicted Secondary structure																																					.																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	F	N	K	Q	H	F	V	V	G	L	K	E	T	L	K	A	L	K	K	D	Q	V	T	S	L	I	I	A	E	D	V	E	V	.	Y	L	M	T	R	V	L	S	Q	I	N	Q	K	N	I	P	V	S	F	F	K	S	K	H	A	L	G	K	H	V	G	.	.	.	.	.	.	.	.	.	.	.	I	N
Query Conservation																																					.																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	N	C	Q	D	A	I	S	K	G	L	H	E	V	L	R	T	I	E	A	K	Q	A	L	F	V	C	V	A	E	D	C	D	Q	G	N	Y	V	K	L	V	K	A	L	C	A	K	N	E	I	K	Y	V	S	V	P	K	R	A	S	L	G	E	Y	L	G	H	F	T	A	N	A	K	G	E	I	K	K	V
Template Known Secondary structure		T	T	T	S	S	S					S											T			S						S	S			S	T	T												T	T							S		S								T		B				T	T	S					B
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	A	T	I	V	A	L	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	C	S	S	L	A	I	R	K
Template Known Secondary structure										S	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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