Return to main results Retrieve Phyre Job Id

Job DescriptionP60430
Confidence6.66%DateTue Jul 17 17:05:11 BST 2012
Rank89Aligned Residues45
% Identity13%Templatec3uepB_
PDB info PDB header:protein transportChain: B: PDB Molecule:yscq-c, type iii secretion protein; PDBTitle: crystal structure of yscq-c from yersinia pseudotuberculosis
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   123......130.........140.........150.........160.......
Predicted Secondary structure 


















Query SS confidence 












































Query Sequence  DIKVGNALPLQNIPVGTVVHNIELKPGKGGQIARSAGASAQVLGK
Query Conservation   
  

  

  

 

 
 


  

 

 
 




 
 

 
Alig confidence 












































Template Conservation   
  



 
       
 
   
  
  



      



  
Template Sequence  SLEPGSLIDLTTPVDGEVRLLANGRLLGHGRLVEIQGRLGVRIER
Template Known Secondary structure  T

TT





S
SS
TTTT
Template Predicted Secondary structure 
















Template SS confidence 












































   256...260.........270.........280.........290.........300
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions