Job Description P60430 Confidence 21.36% Date Tue Jul 17 17:05:11 BST 2012 Rank 37 Aligned Residues 71 % Identity 28% Template c2xzn2_ PDB info PDB header:ribosome Chain: 2: PDB Molecule:40s ribosomal protein s8; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50															.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																							.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	N	G	R	R	N	M	T	S	L	D	F	A	E	I	T	K	T	T	P	E	K	S	L	L	K	P	L	P	K	K	A	G	R	N	N	.	Q	G	K	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	H	H	G	G	G	H	K	R	Q	Y	R	V	I	D	F	K	R	N	K	D	G
Query Conservation																																							.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																						.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		I	S	R	D	S	K	H	K	R	R	.	.	.	.	.	.	A	T	G	G	R	M	P	V	H	R	K	K	R	A	F	E	K	G	R	P	I	S	M	T	K	L	T	T	Q	S	T	T	I	T	E	K	R	R	I	R	P	V	R	V	R	G	G	H	L	K	F	R	A	L	R	L	C	E	G	N	F	S	W	G
Template Known Secondary structure						G	G	G	S			.	.	.	.	.	.	T	T	T							S				G	G	G												T	T	T	T	T			S										S	S	S										S							T
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.							.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		74						.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		I	.	.	.	.	.	N	A	K	V	D	S	I	Q	Y	D	P
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.
Template Conservation
Template Sequence		S	E	N	I	T	R	K	T	K	I	L	D	V	K	Y	N	A
Template Known Secondary structure		T	T	T														S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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