Job Description P60430 Confidence 24.29% Date Tue Jul 17 17:05:11 BST 2012 Rank 36 Aligned Residues 72 % Identity 22% Template c2kcyA_ PDB info PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s8e; PDBTitle: solution structure of ribosomal protein s8e from2 methanothermobacter thermautotrophicus,3 northeaststructural genomics consortium (nesg) target tr71d Resolution UNK

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		T	V	R	H	H	G	G	G	H	K	R	Q	Y	R	V	I	D	F	K	R	N	K	D	G	I	.	.	.	.	.	N	A	K	V	D	S	I	Q	Y	D	P	N	R	S	A	N	I	A	L	V	V	Y	A	D	G	E	K	R	Y	I	I	A	P	K	G	L	E	V	G	Q	I	V	E	S	G	A	E	A	D	I
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.					.	.	.																				.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.					.	.	.																				.	.
Template Sequence		L	I	R	T	R	G	G	N	T	K	V	R	L	A	S	D	T	R	I	N	V	V	D	P	E	T	G	K	V	E	I	A	E	I	R	N	V	V	E	N	T	.	.	.	.	.	.	.	.	.	.	.	A	N	P	H	.	.	.	F	V	R	R	N	I	I	T	R	G	A	V	V	E	T	N	L	G	N	.	.
Template Known Secondary structure														T	T	S	S								T	T	T										B		T	T	S		.	.	.	.	.	.	.	.	.	.	.		S		S	.	.	.	S								T	T						T	T			.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.					.	.	.																				.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.												.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	G	N	A	L	P	L	Q	N	I	P	V	G	T	V	V	H	N	I	E	L	K	P	G	K	G	G	Q	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	V	T	S	R	P	G	Q	D	G	V	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S		T	T	S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			71	.	.	.	.	.	.	.	.	80	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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