Job Description O05154 Confidence 91.01% Date Tue Jul 17 17:05:01 BST 2012 Rank 34 Aligned Residues 195 % Identity 11% Template d1iina_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases glucose-1-phosphate thymidylyltransferase Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																											.																													.
Query SS confidence																											.																													.
Query Sequence		I	P	T	C	N	N	E	A	T	I	R	Q	L	L	I	S	I	E	S	K	E	H	Y	R	I	.	L	C	I	D	G	G	S	T	D	Q	T	I	P	M	I	E	R	L	Q	R	E	L	K	H	I	S	L	I	.	Q	L	Q	N	A	S	I	A	T	C	I	N	K	G	L	M	D	I	K	M	T	D	P	H	D
Query Conservation																											.																													.
Alig confidence								.																			.																													.																				.	.	.	.	.	.
Template Conservation								.																																																																				.	.	.	.	.	.
Template Sequence		L	P	I	Y	D	K	.	P	M	I	Y	Y	P	L	S	T	L	M	L	A	G	I	R	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	Q	W	G	L	N	L	Q	Y	K	V	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	E	F	I	G	.	.	.	.	.	.
Template Known Secondary structure		S			T	T		.		T	T										T	T										T	T	T									T	T	S	G	G	G	T									S	S				T	T						T					T	.	.	.	.	.	.
Template Predicted Secondary structure								.																																																																				.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	A	F	M	V	I	K	P	T	S	I	V	L	P	G	K	L	D	R	L	T	A	A	F	K	N	N	D	N	I	D	M	V	I	G	Q	R	A	Y	N	Y	H	G	E	W	K	L	K	S	A	D	E	F	I	K	D	N	R	I	V	T	L	T	E	Q	P	D	L	L	S	M	M	S	F	D	G	K	L	F
Query Conservation
Alig confidence																																																																						.	.
Template Conservation																																																																						.	.
Template Sequence		H	D	D	C	A	L	V	L	G	D	N	I	F	Y	G	H	D	L	P	K	L	M	E	A	A	V	N	K	E	S	G	A	T	V	F	A	Y	H	V	N	D	P	E	R	Y	G	V	V	E	F	D	Q	K	G	T	A	V	S	L	E	E	K	P	L	Q	P	K	S	.	.	N	Y	A	V	T	G	L	Y	F	Y
Template Known Secondary structure		T	S							T	T						T	T												S	S	S									S		G	G	G	S							S	S	S								S		S	S		S		.	.	S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.
		165	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		S	A	K	F	.	.	.	.	A	E	L	Q	C	D	E	T	L	A	N	T	Y	N	H	A	I	L	V	K	A	M	Q	K	A	T	D	I	H	L	V	S	Q	M	I	V	G	D	N	D	I	D	T
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.												.
Template Conservation																					.
Template Sequence		D	N	S	V	V	E	M	A	K	N	L	K	P	S	A	R	G	E	L	.	E	I	T	D	I	N	R	I	Y	M	E	Q	G	R	L	S	V	A	M	M	G	R	G	Y	A	W	L	D	T	G	T
Template Known Secondary structure			T	T												T	T	S	S		.												T	T									T	T							S	S
Template Predicted Secondary structure																					.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions