 |
| Job Description | O05154 | | Confidence | 76.40% | Date | Tue Jul 17 17:05:01 BST 2012 |
| Rank | 50 | Aligned Residues | 106 |
| % Identity | 13% | Template | d1eyra_ |
| SCOP info | Nucleotide-diphospho-sugar transferases
| Nucleotide-diphospho-sugar transferases
| Cytidylytransferase
|
| Resolution | 2.20 |
|
 |
|   |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | N | E | A | T | I | R | Q | L | L | I | S | I | E | S | K | E | H | Y | R | I | L | C | I | D | G | G | S | T | D | Q | T | I | P | M | I | E | R | L | Q | R | E | L | K | H | I | S | L | I | Q | L | Q | N | A | S | I | A | T | C | I | N | K | G | L | M | D | I | K | M | T | D | P | H | D | S | D | A | F | M | V |
| Query Conservation |   |
|   |
|   |   |
|   |   |   |
|   |
|
|
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |
|   |   |   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
| Template Sequence |   |
N | G | I | S | L | L | G | H | T | I | N | A | A | I | S | S | K | C | F | D | R | I | I | V | S | T | D | G | G | L | . |
. |
. |
. |
I | A | E | E | A | K | N | F | G | V | E | V | V | L | R | P | A | E | L | A | S | D | T | A | S | S | I | S | G | V | I | H | A | L | E | T | I | G | S | N | S | G | T | V | T | L |
| Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |  |  | S |
|  |  | . | . | . | . |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
|  |  |  |  | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
|
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
|   |
|   |   |
91 | . | . | . | . | |
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
| Predicted Secondary structure |   |
 |
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
I | K | P | T | S | . |
I | V | L | P | G | K | L | D | R | L | T | A | A | F | K | N | N | D | N | I | D | M | V | I | G |
| Query Conservation |   |
|
|   |
|
| . |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
| Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
L | Q | P | T | S | P | L | R | T | G | A | H | I | R | E | A | F | S | L | F | D | E | K | I | K | G | S | V | V | S | A |
| Template Known Secondary structure |   |
|
| T | T |
| T | T |
|
|  |  |  |  |  |  |  |  | T | T |
|
| T | T | T |
|
|
|  |  |  |  |
| Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|