Job Description O05154 Confidence 61.20% Date Tue Jul 17 17:05:01 BST 2012 Rank 62 Aligned Residues 108 % Identity 9% Template c3pnnA_ PDB info PDB header:transferase Chain: A: PDB Molecule:conserved domain protein; PDBTitle: the crystal structure of a glycosyltransferase from porphyromonas2 gingivalis w83 Resolution 1.90 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																													.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	N	E	A	T	I	R	Q	L	L	I	S	I	E	S	K	E	H	Y	R	I	L	C	I	D	G	G	.	S	T	D	Q	T	I	P	M	I	E	R	L	Q	R	E	L	K	H	I	S	L	I	Q	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	S	I	A	T	C	I	N	K	G
Query Conservation																													.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	D	T	I	X	D	Y	S	V	Y	D	A	I	R	A	G	F	G	R	L	V	F	V	I	R	H	S	F	E	K	E	F	R	E	K	I	L	T	K	Y	E	G	R	I	P	V	E	L	V	F	Q	E	L	D	R	L	P	E	G	F	S	C	P	E	G	R	E	K	P	W	G	T	N	H	A	V	L	X	G
Template Known Secondary structure		T	S															T										G	G	G								T					T	T	T	S									T	T				T	T					T	T			S										T	T
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	D	I	K	M	T	D	P	H	D	S	D	A	F	M	V	I	K	P	T	S	I	V	L	P	G	K	L	D	R	L	T	A	A	F	K	N	N	D	N	I	D	M	V	I	G	Q	R	A	Y	N
Query Conservation
Alig confidence						.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.
Template Sequence		R	D	A	I	.	.	.	.	.	.	.	R	E	P	F	A	V	I	N	A	D	D	F	Y	G	R	N	G	F	E	V	L	A	R	K	L	X	T	L	E	G	K	Q	G	E	Y	C	X	V	G	Y	R
Template Known Secondary structure		T	T	T		.	.	.	.	.	.	.		S							S	S		B															T	T	T	T		S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.								.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions