Job Description O05154 Confidence 94.60% Date Tue Jul 17 17:05:01 BST 2012 Rank 24 Aligned Residues 112 % Identity 11% Template c3oamD_ PDB info PDB header:transferase Chain: D: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase; PDBTitle: crystal structure of cytidylyltransferase from vibrio cholerae Resolution 1.75 Å

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		1	.	.	.	.	.	.	.	.															10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	F	T	I	I	I	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	N	N	E	A	T	I	R	Q	L	L	I	S	I	E	S	K	E	H	Y	R	I	L	C	I	D	G	G	S	T	D	Q	T	I	P	M	I	E	R	L	Q	R	E	L	K	H	I	S	L	I	Q	L	Q	N	A	S	I
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template Conservation																																																					.	.	.	.	.
Template Sequence		M	S	F	T	V	V	I	P	A	R	Y	Q	S	T	R	L	P	G	K	P	L	A	D	I	G	G	K	P	M	I	Q	W	V	Y	E	Q	A	M	Q	A	G	A	D	R	V	I	I	A	T	D	D	.	.	.	.	.	E	R	V	E	Q	A	V	Q	A	F	G	G	V	V	C	M	T	S	P	N	H	Q	S	G
Template Known Secondary structure												S			S	S	S	T	T	G	G	G				T	T														T	T		S							S		.	.	.	.	.										T	T								S	S	S			S
Template Predicted Secondary structure																																																					.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		A	T	C	I	N	K	G	L	M	D	I	K	M	T	D	P	H	D	S	D	A	F	M	V	I	K	P	T	S	.	I	V	L	P	G	K	L	D	R	L	T	A	A	F	K	N	N	D	N	I	D	M	V	I	G
Query Conservation																															.
Alig confidence																	.	.	.												.
Template Conservation																	.	.	.
Template Sequence		T	E	R	L	A	E	V	V	A	K	M	A	I	P	A	.	.	.	D	H	I	V	V	N	V	Q	G	D	E	P	L	I	P	P	A	I	I	R	Q	V	A	D	N	L	A	A	C	S	A	P	M	A	T	L	A
Template Known Secondary structure												T	T			T	.	.	.	T								T	T		T	T															T	S	S		S
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions