Job Description O05154 Confidence 58.93% Date Tue Jul 17 17:05:01 BST 2012 Rank 63 Aligned Residues 85 % Identity 6% Template c3o85A_ PDB info PDB header:ribosomal protein Chain: A: PDB Molecule:ribosomal protein l7ae; PDBTitle: giardia lamblia 15.5kd rna binding protein Resolution 1.81 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	Q	L	L	I	S	I	E	S	K	E	H	Y	R	I	L	C	I	D	G	G	S	T	D	Q	T	I	P	M	I	E	R	L	Q	R	E	L	K	H	I	S	L	I	Q	L	Q	N	A	S	I	A	T	C	I	N	K	G	L	M	D	I	K	M	T	D	P	H	D	S	D	A	F	M	V	I	K	P	T	S
Query Conservation
Alig confidence																																																																	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.
Template Sequence		A	N	E	A	L	K	Q	V	N	R	G	K	A	E	L	V	I	I	A	A	D	A	D	P	I	E	I	V	L	H	L	P	L	A	C	E	D	K	G	V	P	Y	V	F	I	G	S	K	N	A	L	G	R	A	C	N	V	S	V	P	T	I	V	.	.	.	.	.	.	.	.	.	A	S	I	G	K	H	D	A
Template Known Secondary structure											T	T			S						T	T		S	S	G	G	G	G	T	T							T	T	T							S									T	T		S	S			S		.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.										.	100	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	L	P	G	K	L	D	R	L	T	A	A	F	K	N
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		L	.	.	G	N	V	V	A	E	I	V	G	K	V	E	A
Template Known Secondary structure		T	.	.													T
Template Predicted Secondary structure			.	.
Template SS confidence
		107			.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions