Job Description O05154 Confidence 65.82% Date Tue Jul 17 17:05:01 BST 2012 Rank 59 Aligned Residues 74 % Identity 14% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	P	T	C	N	N	E	A	T	I	R	Q	L	L	I	S	I	E	S	K	E	H	Y	R	I	L	C	I	D	G	G	S	T	D	Q	T	I	P	M	I	E	R	L	Q	R	E	L	K	H	I	S	L	I	Q	L	Q	N	A	S	I	A	T	C	I	N	K	G	L	M	D	I	K	M	T	D	P	H	D	S
Query Conservation
Alig confidence																			.	.	.	.	.																																										.
Template Conservation																			.	.	.	.	.																																										.
Template Sequence		I	I	P	A	A	H	N	Q	K	D	M	E	K	I	L	E	L	.	.	.	.	.	D	L	T	Y	M	V	M	L	E	T	H	V	A	Q	L	K	A	L	V	K	Y	A	Q	A	G	G	K	K	V	L	L	H	A	D	L	V	N	G	L	K	N	.	D	D	Y	A	I	D	F	L	C	T	E	I	C	P	D	G
Template Known Secondary structure							S	S	S							T	T	S	.	.	.	.	.	S								S			T	T	T											T	T							G	G	G			T				.	S										T	T			S
Template Predicted Secondary structure																			.	.	.	.	.																																										.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions