Job Description O05154 Confidence 37.84% Date Tue Jul 17 17:05:01 BST 2012 Rank 79 Aligned Residues 70 % Identity 17% Template c2zkr6_ PDB info PDB header:ribosomal protein/rna Chain: 6: PDB Molecule:60s ribosomal protein l30e; PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map Resolution 8.70 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		I	R	Q	L	L	I	S	I	E	S	K	E	H	Y	R	I	L	C	I	D	G	G	S	T	D	Q	T	I	P	M	I	E	R	L	Q	R	E	L	K	H	.	I	S	L	I	Q	L	Q	N	A	S	I	A	T	C	I	N	K	G	L	M	D	I	K	M	T	D	P	H	D	S	D	A	F	M	V	I	K	P	T
Query Conservation																																										.
Alig confidence																											.															.																								.	.	.	.	.	.	.	.	.
Template Conservation																											.																																							.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	Q	T	L	K	M	I	R	Q	G	K	A	K	L	V	I	L	A	N	N	C	P	A	L	.	R	K	S	E	I	E	Y	Y	A	M	L	A	K	T	G	V	H	H	Y	S	G	N	N	I	E	L	G	T	A	C	G	K	Y	Y	R	V	C	T	.	.	.	.	.	.	.	.	.	L	A	I	I	D	P	G
Template Known Secondary structure												T									T	T			S	S	.	T	T	T										T								S										T		S	S			S		.	.	.	.	.	.	.	.	.					S	S	S
Template Predicted Secondary structure																											.																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.										.	.	.	.	.	.	100
		95
Predicted Secondary structure
Query SS confidence
Query Sequence		S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		101

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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