Job Description O05154 Confidence 100.00% Date Tue Jul 17 17:05:01 BST 2012 Rank 1 Aligned Residues 201 % Identity 13% Template c2z86D_ PDB info PDB header:transferase Chain: D: PDB Molecule:chondroitin synthase; PDBTitle: crystal structure of chondroitin polymerase from2 escherichia coli strain k4 (k4cp) complexed with udp-glcua3 and udp Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		R	F	T	I	I	I	P	T	C	N	N	E	A	T	I	R	Q	L	L	I	S	I	.	.	E	S	K	E	H	Y	R	I	L	C	I	D	G	G	S	T	D	Q	T	I	P	M	I	E	R	L	Q	R	E	L	K	H	I	S	L	I	Q	L	Q	N	A	S	I	A	T	C	I	N	K	G	L	M	D	I	K	M
Query Conservation																								.	.
Alig confidence																								.	.																																																								.
Template Conservation																																																																																	.
Template Sequence		L	V	S	I	Y	I	P	A	Y	N	C	S	K	Y	I	V	R	C	V	E	S	A	L	N	Q	T	I	T	D	L	E	V	C	I	C	D	D	G	S	T	D	D	T	L	R	I	L	Q	E	H	Y	A	N	H	P	R	V	R	F	I	S	Q	K	N	K	G	I	G	S	A	S	N	T	A	V	R	L	C	R	.
Template Known Secondary structure		S								S	S		T	T	T										S		S			S									S		S	S	T										T	T		T	T																								.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	P	H	D	S	D	A	F	M	V	I	K	P	T	S	I	V	L	P	G	K	L	D	R	L	T	A	A	F	K	N	N	D	N	I	D	M	V	I	G	Q	R	A	Y	N	Y	H	G	E	W	K	L	K	S	A	D	E	F	I	K	D	N	R	I	V	T	L	T	E	Q	P	D	L	L	S	M	M	S	F
Query Conservation
Alig confidence		.	.	.	.	.																																																				.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																																				.	.	.	.	.	.
Template Sequence		.	.	.	.	.	G	F	Y	I	G	Q	L	D	S	D	D	F	L	E	P	D	A	V	E	L	C	L	D	E	F	R	K	D	L	S	L	A	C	V	Y	T	T	N	R	N	I	D	R	E	G	N	L	I	S	N	G	.	.	.	.	.	.	Y	N	W	P	I	Y	S	R	E	K	L	T	S	A	M	I	C	H
Template Known Secondary structure		.	.	.	.	.	S	S							T	T					T	T													T	T													T	T	S							.	.	.	.	.	.				S	S									S
Template Predicted Secondary structure		.	.	.	.	.																																																				.	.	.	.	.	.
Template SS confidence
							512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.							.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
		160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		D	G	K	L	F	S	A	K	F	A	E	.	.	L	Q	C	D	E	T	L	A	N	T	Y	N	H	A	I	L	V	K	A	M	Q	K	A	T	D	I	H	L	V	S	Q	M	I	V	G	D	N	D	I	D	T	H	A	T	S
Query Conservation													.	.
Alig confidence													.	.																								.
Template Conservation																																						.
Template Sequence		H	F	R	M	F	T	A	R	A	W	N	L	T	E	G	F	N	E	S	I	S	N	A	V	D	Y	D	M	Y	L	K	L	S	E	V	G	.	P	F	K	H	I	N	K	I	C	Y	N	R	V	L	H	D	I	Q	K	E	N
Template Known Secondary structure		S											T	T	T		S		S	S		S	S	S										T	T	T	S	.
Template Predicted Secondary structure																																						.
Template SS confidence
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.		.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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