Job Description O05154 Confidence 21.24% Date Tue Jul 17 17:05:01 BST 2012 Rank 103 Aligned Residues 137 % Identity 14% Template c2c0nA_ PDB info PDB header:viral protein/transferase Chain: A: PDB Molecule:a197; PDBTitle: crystal structure of a197 from stiv Resolution 1.86 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	D	Q	T	I	P	M	I	E	R	L	Q	R	E	L	K	H	I	S	L	I	Q	L	Q	N	A	S	I	A	T	C	I	N	K	G	L	M	D	I	K	M	T	D	P	H	D	S	D	A	F	M	V	I	K	P	T	S	I	V	L	P	G	K	L	D	R	L	T	A	A	F	K	N	N	D	N	I	D	M
Query Conservation
Alig confidence																																											.	.																																.	.
Template Conservation																																											.	.																																.	.
Template Sequence		S	X	G	S	V	R	L	P	L	I	D	F	L	V	K	N	D	I	E	Y	V	I	L	S	R	R	N	H	V	A	V	Q	R	E	I	A	L	D	X	F	L	.	.	E	X	K	D	Y	D	T	L	A	F	L	D	E	D	V	V	P	I	E	I	D	F	Q	K	V	E	A	K	F	N	E	.	.	G	Y	D	V
Template Known Secondary structure			S	S													T	T										S															.	.			T	T									T	T																		.	.	T		S
Template Predicted Secondary structure																																											.	.																																.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		V	I	G	Q	R	A	Y	N	Y	H	G	E	W	K	L	K	S	A	D	E	F	I	K	D	N	R	I	V	T	L	T	E	Q	P	D	L	L	S	M	M	S	F	D	G	K	L	F	S	A	K	F	A	E	.	L	Q	C	D	E	T	L	A	N	T	Y	N	H	A	I	L
Query Conservation																																																							.
Alig confidence								.	.	.	.	.	.	.	.																																								.
Template Conservation								.	.	.	.	.	.	.	.
Template Sequence		V	C	G	Y	Y	Y	.	.	.	.	.	.	.	.	L	K	T	L	R	G	Y	S	V	Y	R	K	D	W	E	K	E	I	F	D	G	E	V	N	G	C	G	L	G	F	T	F	I	K	R	E	F	L	E	K	I	K	R	P	A	F	L	A	I	G	E	D	V	Y	F	F
Template Known Secondary structure							B	.	.	.	.	.	.	.	.		T	T	S	S	S	B	S			S	S	S	B		S	S							S				S	S										T	T	S		S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions