 |
| Job Description | P47768 | | Confidence | 19.76% | Date | Tue Jul 17 17:05:10 BST 2012 |
| Rank | 30 | Aligned Residues | 21 |
| % Identity | 43% | Template | c2db3D_ |
| PDB info |
PDB header:hydrolase/rna | Chain: D: PDB Molecule:atp-dependent rna helicase vasa; |
PDBTitle: structural basis for rna unwinding by the dead-box protein2 drosophila vasa
|
| Resolution | 2.20 Å |
|
|   |   |
926 | . | . | . | 930 | . | . | . | . | . | |
. | . | . | . | 940 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  | . |  |  |  |  |  |
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
C | G | R | H | G | N | K | G | V | I | . |
S | K | I | V | P | E | E | D | M | P | Y |
| Query Conservation |   |
|
|
|
|
|
|
|
|
|   | . |
|   |
|   |   |   |
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
T | G | R | V | G | N | N | G | R | A | T | S | F | F | D | P | E | K | D | R | A | I |
| Template Known Secondary structure |   |
S | S |
| T | T |
|
|  |  |  |  |  |  |  |
| T | T | T |
|  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|