Job Description P47768 Confidence 20.63% Date Tue Jul 17 17:05:10 BST 2012 Rank 27 Aligned Residues 63 % Identity 24% Template c2c2lD_ PDB info PDB header:chaperone Chain: D: PDB Molecule:carboxy terminus of hsp70-interacting protein; PDBTitle: crystal structure of the chip u-box e3 ubiquitin ligase Resolution 3.3 Å

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		997	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.			.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		D	D	D	V	W	S	T	I	E	E	A	G	M	A	R	D	G	K	T	V	L	Y	D	G	R	T	G	E	P	F	D	N	R	I	S	V	.	.	G	V	M	Y	M	L	K	L	A	H	M	V	D	D	K	L	H	A	R	S	T	G	P	Y	S	L	V	T	Q	Q	P	L
Query Conservation																																						.	.
Alig confidence																																						.	.					.	.	.								.	.
Template Conservation																																												.	.	.								.	.
Template Sequence		M	D	E	L	F	S	Q	V	D	E	K	R	K	K	R	D	I	P	D	Y	L	C	G	K	I	S	F	E	L	M	R	E	P	C	I	T	P	S	G	I	T	Y	.	.	.	D	R	K	D	I	E	E	.	.	H	L	Q	R	V	G	H	F	N	P	V	T	R	S	P	L
Template Known Secondary structure																				G	G	G	B		T	T	T		S	B		S	S					T	T	S				.	.	.		T	T					.	.			T	T	T		S	B		T	T	T			B
Template Predicted Secondary structure																																												.	.	.								.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions