Return to main results Retrieve Phyre Job Id

Job DescriptionO33599
Confidence26.56%DateTue Jul 17 17:05:02 BST 2012
Rank96Aligned Residues59
% Identity22%Templatec3o0pA_
PDB info PDB header:transferase , hydrolaseChain: A: PDB Molecule:sortase family protein; PDBTitle: pilus-related sortase c of group b streptococcus
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   212.......220.........230.........240.. .......250.........260.........270..
Predicted Secondary structure 















...












Query SS confidence 






























. . .





























Query Sequence  GVDYAMPENSPVYSLTDGTVVQAGWSNYGGG. . . NQVTIKEANSNNYQWYMHNNRLTVSAGDKV
Query Conservation 


     
 

 
   
 
   
    
 
...
 
 
 
      
 
 
     
  
  
Alig confidence 






























...





















..





Template Conservation   
  

  
     
  
 
    
  
  
   
 




        
  
  
..  

 
Template Sequence  GQKLPIFAGSSQEVLSKGAGHLEGTSLPIGGNSTHTVITAHSGIPDKELFSNLKKL. . KKGDKF
Template Known Secondary structure  TSS

TTS
TTS

SS

TT

S

TT

TTTTGGG
..
TT
Template Predicted Secondary structure 




























..



Template SS confidence 































































   117..120.........130.........140.........150.........160.........170.. ......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions