Job Description O33599 Confidence 100.00% Date Tue Jul 17 17:05:02 BST 2012 Rank 6 Aligned Residues 205 % Identity 21% Template c3nyyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative glycyl-glycine endopeptidase lytm; PDBTitle: crystal structure of a putative glycyl-glycine endopeptidase lytm2 (rumgna_02482) from ruminococcus gnavus atcc 29149 at 1.60 a3 resolution Resolution 1.60 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.
Query Sequence		T	Y	V	N	P	A	T	A	G	D	N	N	D	Y	T	A	S	Q	S	Q	Q	H	I	N	Q	Y	G	Y	Q	S	N	V	G	P	D	A	.	.	.	.	.	.	.	S	Y	Y	S	H	S	N	N	N	Q	A	Y	N	S	H	D	G	N	G	K	V	N	Y	P	N	G	T	S	N	Q	N	G	G	S	A	S	K
Query Conservation																																						.	.	.	.	.	.	.
Alig confidence															.																							.	.	.	.	.	.	.
Template Conservation															.
Template Sequence		Q	R	L	Q	K	P	V	V	S	Q	P	D	F	.	R	R	Q	P	V	S	E	T	X	Q	V	Y	L	K	Q	A	A	D	P	G	R	D	V	G	L	Y	W	X	A	T	D	F	E	N	R	R	F	P	G	K	V	S	P	S	G	F	Q	K	L	Y	R	Q	W	R	N	Q	T	G	W	D	A	Y	V	Q	S	C
Template Known Secondary structure					T	S		S	T	T	S				.														T	T		S	S													T	T	T	T	S				S		S	S												T	T	S	T	T
Template Predicted Secondary structure															.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.												.	.	.	.	.																			.	.	.	.
Query SS confidence															.	.	.	.	.												.	.	.	.	.																			.	.	.	.
Query Sequence		A	T	A	S	G	H	A	K	D	A	S	W	L	.	.	.	.	.	T	S	R	K	Q	L	Q	P	Y	G	Q	.	.	.	.	.	Y	H	G	G	G	A	H	Y	G	V	D	Y	A	M	P	E	N	S	.	.	.	.	P	V	Y	S	L	T	D	G	T	V	V	Q	A	G	W	S	N	Y	G	G	G	N	Q	V
Query Conservation															.	.	.	.	.												.	.	.	.	.																			.	.	.	.
Alig confidence															.	.	.	.	.												.	.	.	.	.																			.	.	.	.																.
Template Conservation																																																																									.
Template Sequence		R	A	I	W	N	D	V	K	Y	F	P	I	P	Q	S	L	D	D	T	E	D	K	I	S	Y	V	D	S	W	X	F	E	R	N	Y	G	G	K	R	G	H	E	G	T	D	I	X	A	E	K	N	T	P	G	Y	Y	P	V	V	S	X	T	D	G	V	V	T	E	K	G	W	.	L	E	K	G	G	W	R	I
Template Known Secondary structure						T	T			S		S	S				S	S	S	S															T	T		S		T	T									S	S			T	T		S					S	S										.		T	T	T
Template Predicted Secondary structure																																																																									.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.								.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																					.																								.	.	.	.	.	.	.
Query SS confidence																					.																								.	.	.	.	.	.	.
Query Sequence		T	I	K	E	A	N	S	N	N	Y	Q	W	Y	M	H	N	N	R	L	.	T	V	S	A	G	D	K	V	K	A	G	D	Q	I	A	Y	S	G	S	T	G	N	S	.	.	.	.	.	.	.	T	A	P	H	V	H	F	Q	R	M	S	G	G	I	G	N	Q	Y	A	V	D	P	T	S	Y	L	Q
Query Conservation																					.																								.	.	.	.	.	.	.
Alig confidence									.												.																								.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		G	I	T	A	P	T	G	.	A	Y	F	Y	Y	A	H	L	D	S	Y	A	E	L	E	K	G	D	P	V	K	A	G	D	L	L	G	Y	X	G	D	S	G	Y	G	E	E	G	T	T	G	E	F	P	V	H	L	H	L	G	I	Y	L	K	E	G	T	E	E	I	S	V	N	P	Y	P	V	L	R
Template Known Secondary structure						T	T	S	.									S				S			T	T					T	T							B				S	S	S	T	T				S	S													T	T
Template Predicted Secondary structure									.
Template SS confidence
		191	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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