Job Description O33599 Confidence 24.28% Date Tue Jul 17 17:05:02 BST 2012 Rank 98 Aligned Residues 64 % Identity 20% Template c2vbcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dengue 4 ns3 full-length protein; PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus Resolution 3.15 Å

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		213	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.					.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure					.																																																			.	.	.	.
Query SS confidence					.																																																			.	.	.	.
Query Sequence		V	D	Y	.	A	M	P	E	N	S	P	V	Y	S	L	T	D	G	T	V	V	Q	A	G	W	S	N	Y	G	G	G	N	Q	V	T	I	K	E	A	N	S	N	N	Y	Q	W	Y	M	H	N	N	R	L	T	.	.	.	.	V	S	A	G	D	K	V	K	A	G	D	Q	I	A	Y	S	G	S	T	G
Query Conservation					.																																																			.	.	.	.
Alig confidence					.										.								.	.			.	.	.	.									.	.																.	.	.	.
Template Conservation															.								.	.			.	.	.	.									.	.
Template Sequence		L	D	F	K	P	G	T	S	G	S	P	I	I	.	N	K	K	G	K	V	I	.	.	G	L	.	.	.	.	Y	G	N	G	V	V	T	K	.	.	S	G	D	Y	V	S	A	I	T	Q	A	E	R	I	G	E	P	D	Y	E	V	D	E	D	I	F	R	K	K	R	L	T	I	M	D	L	H	P	G
Template Known Secondary structure						T	T		T	T					.		S	S	S	S			.	.			.	.	.	.								S	.	.	S	S	S													S											S	T	T									T	T
Template Predicted Secondary structure															.								.	.			.	.	.	.									.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.			.	.					150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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