Job Description O33599 Confidence 94.55% Date Tue Jul 17 17:05:02 BST 2012 Rank 17 Aligned Residues 55 % Identity 22% Template c2lmcB_ PDB info PDB header:transcription Chain: B: PDB Molecule:dna-directed rna polymerase subunit beta; PDBTitle: structure of t7 transcription factor gp2-e. coli rnap jaw domain2 complex Resolution UNK

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		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		V	Y	S	L	T	D	G	T	V	V	Q	A	G	W	S	N	Y	G	G	G	N	Q	V	T	I	K	E	A	N	S	N	.	N	Y	Q	W	Y	M	H	N	N	R	L	T	V	S	A	G	D	K	V	K	A	G	D	Q	I
Query Conservation																																	.
Alig confidence															.																		.
Template Conservation															.
Template Sequence		I	L	A	E	I	S	G	I	V	S	F	G	K	.	E	T	K	G	K	R	R	L	V	I	T	P	V	D	G	S	D	P	Y	E	E	M	I	P	K	W	R	Q	L	N	V	F	E	G	E	R	V	E	R	G	D	V	I
Template Known Secondary structure		B	S	B	S	S	S								.		S	S	S									S	S	S	S									T	T	S			S	S		T	T					B	S		S	S
Template Predicted Secondary structure															.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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