Job Description O33599 Confidence 72.13% Date Tue Jul 17 17:05:02 BST 2012 Rank 48 Aligned Residues 49 % Identity 24% Template c2dsjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyrimidine-nucleoside (thymidine) phosphorylase; PDBTitle: crystal structure of project id tt0128 from thermus thermophilus hb8 Resolution 1.80 Å

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		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.													.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	Y	S	L	T	D	G	T	V	V	Q	A	G	W	S	N	Y	G	G	G	N	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	T	I	K	E	A	N	S	N	N	Y	Q	W	Y	M	H	N	N	R	L	T	V	S	A	G	D	K	V	K	A	G	D	Q	I	A	Y	S
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.										.	.	.	.	.	.	.	.	.	.	.	.								.	.						.	.	.	.	.	.	.
Template Conservation															.	.																													.	.						.	.	.	.	.	.	.
Template Sequence		P	L	R	A	E	R	E	G	V	V	R	E	V	.	.	D	A	Y	K	V	G	L	A	V	L	A	L	G	G	G	R	K	R	K	G	E	P	I	D	H	G	V	G	.	.	V	Y	L	L	K	.	.	.	.	.	.	.	K	P	G	D	R	V	E	R	G	E	A	L	A	L	V
Template Known Secondary structure						S	S								.	.													T	S	S		S	S	T	T					T	T			.	.				S		.	.	.	.	.	.	.		T	T					T	T	S
Template Predicted Secondary structure															.	.																													.	.						.	.	.	.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.								.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions