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Job DescriptionO33599
Confidence100.00%DateTue Jul 17 17:05:02 BST 2012
Rank5Aligned Residues129
% Identity100%Templatec2b44A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glycyl-glycine endopeptidase lytm; PDBTitle: truncated s. aureus lytm, p 32 2 1 crystal form
Resolution1.83 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210.........220.........230.........240.........250.........260.....
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Query Sequence  AKDASWLTSRKQLQPYGQYHGGGAHYGVDYAMPENSPVYSLTDGTVVQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLT
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Template Sequence  AKDASWLTSRKQLQPYGQYHGGGAHYGVDYAMPENSPVYSLTDGTVVQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLT
Template Known Secondary structure 

STTS

S
TTSS
S

TT

SSS
SSS
STTSSSSB
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   186...190.........200.........210.........220.........230.........240.........250.........260.....
 
   266...270.........280.........290.........300.........310....
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Query Sequence  VSAGDKVKAGDQIAYSGSTGNSTAPHVHFQRMSGGIGNQYAVDPTSYLQ
Query Conservation 
  
  
  

 

  
 

     





   
      


   
 
Alig confidence 
















































Template Conservation 
  
  
  
  

 

 

     





   
      


   
 
Template Sequence  VSAGDKVKAGDQIAYSGSTGNSTAPHVHFQRMSGGIGNQYAVDPTSYLQ
Template Known Secondary structure 

TT

TT

B

SS

SSSSSSGGG


Template Predicted Secondary structure 





























Template SS confidence 
















































   266...270.........280.........290.........300.........310....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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